Difference between revisions of "YdfJ"

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(Extended information on the protein)
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* '''Description:''' similar to antibiotic transport-associated protein <br/><br/>
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU05430 ydfJ]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 76 kDa, 5.18   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 76 kDa, 5.18   

Revision as of 15:26, 6 August 2012


Gene name ydfJ
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ydfJ
MW, pI 76 kDa, 5.18
Gene length, protein length 2172 bp, 724 aa
Immediate neighbours ydfI, nap
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdfJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdfJ expression.png
























Categories containing this gene/protein

resistance against toxins/ antibiotics, membrane proteins

This gene is a member of the following regulons

YdfI regulon

The gene

Basic information

  • Locus tag: BSU05430

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: mmpL family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism: YdfI: transcription activation PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Masakuni Serizawa, Junichi Sekiguchi
The Bacillus subtilis YdfHI two-component system regulates the transcription of ydfJ, a member of the RND superfamily.
Microbiology (Reading): 2005, 151(Pt 6);1769-1778
[PubMed:15941986] [WorldCat.org] [DOI] (P p)