ydcP

ydcP
168

helicase processivity factor

locus
BSU_04850
Molecular weight
13.84 kDa
pI
5.31
Protein length
Gene length
function
conjugation and replication of ICEBs1
product
helicase processivity factor
essential
no
synonyms
ydcP, ydcP

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms

This gene is a member of the following regulons

Gene
Coordinates
532,922 → 533,302
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The protein
Catalyzed reaction/ biological activity
enables the host-encoded helicase [protein|C73E52D214E24F21696973B19B0A44CE785D6FBA|pcrA] to unwind the double-stranded ICEBs1 DNA [Pubmed|23326247]
Structure
[PDB|2K5D] (from Streptococcus agalactiae, 39% identity)
[AF|P96633]
Expression and Regulation
Operons
genes
[gene|EE2A4068CBD7A2F852E582E2EDA4148381F1CD61|xis]-[gene|2227923C603B290AB276238F789D71584FB07DF3|ydzL]-[gene|34451538F10B4ABCFC8A236C8C905A20D989EBCF|devI]-[gene|C042792D9A643DCFF4A851EFECA3CF2C31E1EDAF|ydcP]-[gene|4BCAA5939CB7F0DF23495BC92C9EF0A0149296A0|ydcQ]-[gene|8E179976C35FE09F92A191D00E497ED4BF28F571|nicK]-[gene|886B2132717BA4C72433ABE351C5791C9DE1432A|S172]-[gene|1699CFBF5400CAF43C6DAE8ADCCE5A360B31F2E9|ydcS]-[gene|9D4918852A1856B1CDD72D49AEA75E51A8602BB6|ydcT]-[gene|62CEABA069CA2970F22B7E0C369D540A2A027A8D|yddA]-[gene|A0AFD543582D2FE8B1139CF69B7B1F7FF0F80265|conB]-[gene|F273A8817E66B44D58FC2BCB6576A30D8616B750|conC]-[gene|F1F898D7A9FDF78D2E5E8F3BF605E0F735D0542A|conD]-[gene|D20F724D8C3E8C758A9FADF133CD43F066BD8D48|conE]-[gene|B3A07E2A61151C33B7C65D1BC58B97BFDB76852D|yddF]-[gene|3356A43B83E2D4D66098F17A751F0912C1553398|conG]-[gene|8D9D81E05BAA8697F002BB1B8DBC5ABBA557353F|cwlT]-[gene|2E4FF80C857B3F40BA835814EC40D6562721AEFE|yddI]-[gene|2FB1C9435AE924F8E450AFA81F800196A871F2D0|yddJ]
description
[pubmed|22383849]
regulatory mechanism
[protein|DD1C8F3A4809785BD6A6047D39B42AB2C605E161|immR]: repression, [Pubmed|17511812], in [regulon|protein:DD1C8F3A4809785BD6A6047D39B42AB2C605E161|immR regulon]
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[gene|EE2A4068CBD7A2F852E582E2EDA4148381F1CD61|xis]->[gene|2FB1C9435AE924F8E450AFA81F800196A871F2D0|yddJ]

2024-03-03 22:58:45

Bzhu

47

9225e26ee70027d168e8ea0db13fb48c93ef1ef8

DE8D2BDC2F23AB45C58B0FE511E7B4816A65A489

Biological materials
Mutant
BKE04850 (Δ[gene|C042792D9A643DCFF4A851EFECA3CF2C31E1EDAF|ydcP]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE04850 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTTTCATATCCCCATTT,  downstream forward: _UP4_TAACATGATGCTCTCATATC
BKK04850 (Δ[gene|C042792D9A643DCFF4A851EFECA3CF2C31E1EDAF|ydcP]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK04850 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTTTCATATCCCCATTT,  downstream forward: _UP4_TAACATGATGCTCTCATATC
References
20525796,23326247

C042792D9A643DCFF4A851EFECA3CF2C31E1EDAF

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Time of last update: 2024-03-28 05:31:54

Author of last update: Jstuelk