Difference between revisions of "YdcO"

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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 258 bp, 86 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 258 bp, 86 aa  
 
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[xis]]'', ''[[ydcP]]''
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydzL]]'', ''[[ydcP]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12291&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12291&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''

Revision as of 10:43, 29 November 2012

Gene name ydcO
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ydcO
MW, pI 10 kDa, 4.806
Gene length, protein length 258 bp, 86 aa
Immediate neighbours ydzL, ydcP
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdcO context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdcO expression.png
























Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU04840

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Irnov Irnov, Cynthia M Sharma, Jörg Vogel, Wade C Winkler
Identification of regulatory RNAs in Bacillus subtilis.
Nucleic Acids Res: 2010, 38(19);6637-51
[PubMed:20525796] [WorldCat.org] [DOI] (I p)