ydcI

ydcI
168

similar to RNase

locus
BSU_04780
Molecular weight
81.23 kDa
pI
6.77
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
ydcI

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2183 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
525,743  527,902
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The protein
[wiki|Domains]
[wiki|YqgF/RNase H-like domain] (aa 321-446) (according to the Interpro database)
[wiki|S1 domain] (aa 646-718) (according to UniProt)
Structure
[PDB|2OCE] (the protein from Pseudomonas aeruginosa, 43% identity)
[AF|O31489]
Modification
phosphorylated on Arg-473 [Pubmed|22517742]
Expression and Regulation
Operons
genes
[gene|A4DB115D36907DE3EE6F80738E4D777838A3FE7F|ydcI]
description
[Pubmed|22383849]
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[gene|A4DB115D36907DE3EE6F80738E4D777838A3FE7F|ydcI]

2024-03-14 11:08:46

ghost

35

a69f5bb504be0ef20320245e9999e0f9332b75f0

CC79079D21DCFA77791C5215E97F1F4FC5C63FB3

Biological materials
Mutant
GP3318 (Δ[gene|A4DB115D36907DE3EE6F80738E4D777838A3FE7F|ydcI]::''phleo''), available in [wiki|Jörg Stülke]'s lab
MGNA-C101 (ydcI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2099 NBRP B. subtilis, Japan]
BKE04780 ([gene|A4DB115D36907DE3EE6F80738E4D777838A3FE7F|ydcI]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE04780 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTAACCAAAGCCTCCAA,  downstream forward: _UP4_TAAAAGCACTGCTTACGAGC
BKK04780 ([gene|A4DB115D36907DE3EE6F80738E4D777838A3FE7F|ydcI]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK04780 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTAACCAAAGCCTCCAA,  downstream forward: _UP4_TAAAAGCACTGCTTACGAGC
References
22517742,22383849

A4DB115D36907DE3EE6F80738E4D777838A3FE7F

Page visits: 1502

Time of last update: 2024-03-28 09:30:51

Author of last update: Rica