Difference between revisions of "YdbM"
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|style="background:#ABCDEF;" align="center"|'''Function''' || sulphur metabolism | |style="background:#ABCDEF;" align="center"|'''Function''' || sulphur metabolism | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU04520 ydbM] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 41 kDa, 5.721 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 41 kDa, 5.721 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydbL]]'', ''[[fbpB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydbL]]'', ''[[fbpB]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04520 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04520 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04520 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:ydbM_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ydbM_context.gif]] | ||
Revision as of 12:10, 13 May 2013
- Description: acyl-CoA dehydrogenase
| Gene name | ydbM |
| Synonyms | |
| Essential | no |
| Product | acyl-CoA dehydrogenase |
| Function | sulphur metabolism |
| Gene expression levels in SubtiExpress: ydbM | |
| MW, pI | 41 kDa, 5.721 |
| Gene length, protein length | 1143 bp, 381 aa |
| Immediate neighbours | ydbL, fbpB |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
poorly characterized/ putative enzymes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU04520
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: acyl-CoA dehydrogenase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P96608
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: ydbM (according to DBTBS)
- Sigma factor:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Sergine Even, Pierre Burguière, Sandrine Auger, Olga Soutourina, Antoine Danchin, Isabelle Martin-Verstraete
Global control of cysteine metabolism by CymR in Bacillus subtilis.
J Bacteriol: 2006, 188(6);2184-97
[PubMed:16513748]
[WorldCat.org]
[DOI]
(P p)
