Difference between revisions of "YdaP"
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| + | * '''Description:''' general stress protein, required for survival of ethanol stress, similar to actolactate synthase | ||
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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* '''Protein family:''' | * '''Protein family:''' | ||
| − | * '''Paralogous protein(s):''' | + | * '''Paralogous protein(s):''' [[AlsS]], [[IlvB]] |
=== Extended information on the protein === | === Extended information on the protein === | ||
Revision as of 17:50, 21 August 2012
- Description: general stress protein, required for survival of ethanol stress, similar to actolactate synthase
| Gene name | ydaP |
| Synonyms | |
| Essential | no |
| Product | putative glyoxalate carboligase |
| Function | utilization of glycolate and glyoxylate |
| Gene expression levels in SubtiExpress: ydaP | |
| MW, pI | 62 kDa, 5.217 |
| Gene length, protein length | 1722 bp, 574 aa |
| Immediate neighbours | mutT, ydzK |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
general stress proteins (controlled by SigB), poorly characterized/ putative enzymes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU04340
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P96591
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: ydaP PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant: GP457 (spc), available in Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528]
[WorldCat.org]
[DOI]
(P p)
Anja Petersohn, Haike Antelmann, Ulf Gerth, Michael Hecker
Identification and transcriptional analysis of new members of the sigmaB regulon in Bacillus subtilis.
Microbiology (Reading): 1999, 145 ( Pt 4);869-880
[PubMed:10220166]
[WorldCat.org]
[DOI]
(P p)
