Difference between revisions of "YdaG"

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** ''[[ydaG]]'': [[SigB]] {{PubMed|10220166}}
 
** ''[[ydaG]]'': [[SigB]] {{PubMed|10220166}}
  
* '''Regulation:''' induced under stress conditions ([[SigB]]) {{PubMed|10220166}}
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* '''Regulation:'''  
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** induced under stress conditions ([[SigB]]) {{PubMed|10220166}}
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** strongly induced in response to glucose starvation in M9 medium {{PubMed|23033921}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
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=References=
 
=References=
 
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'''Additional publications:''' {{PubMed|23033921}}
 
<pubmed>10220166,,15805528, </pubmed>
 
<pubmed>10220166,,15805528, </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:16, 8 October 2012

  • Description: general stress protein

Gene name ydaG
Synonyms yzzA
Essential no
Product unknown
Function survival of ethanol stress and low temperatures
Gene expression levels in SubtiExpress: ydaG
MW, pI 15 kDa, 5.195
Gene length, protein length 420 bp, 140 aa
Immediate neighbours ydaF, bsrC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdaG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdaG expression.png















Categories containing this gene/protein

general stress proteins (controlled by SigB)

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU04220

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • induced under stress conditions (SigB) PubMed
    • strongly induced in response to glucose starvation in M9 medium PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed

Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528] [WorldCat.org] [DOI] (P p)

Anja Petersohn, Haike Antelmann, Ulf Gerth, Michael Hecker
Identification and transcriptional analysis of new members of the sigmaB regulon in Bacillus subtilis.
Microbiology (Reading): 1999, 145 ( Pt 4);869-880
[PubMed:10220166] [WorldCat.org] [DOI] (P p)