YdaF

• Description: similar to acetyltransferase
  
  

Gene name	ydaF
Synonyms
Essential	no
Product	unknown
Function	unknown
MW, pI	20 kDa, 5.564
Gene length, protein length	549 bp, 183 aa
Immediate neighbours	ydaE, ydaG
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList

The gene

Basic information

• Locus tag: BSU04210

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

Categories containing this gene/protein

general stress proteins (controlled by SigB), poorly characterized/ putative enzymes

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: N-acetyltransferase domain (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure: 1NSL

• UniProt: P96579

• KEGG entry: [3]

• E.C. number:

Expression and regulation

• Operon: ydaD-ydaE-ydaF-ydaG PubMed

• Sigma factor: SigB PubMed

• Regulation:
  • induced under stress conditions (SigB) PubMed
  • repressed during logarithmic phase (AbrB) PubMed

• Regulatory mechanism:
  • AbrB: transcription repression PubMed

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Allison V Banse, Arnaud Chastanet, Lilah Rahn-Lee, Errett C Hobbs, Richard Losick
Parallel pathways of repression and antirepression governing the transition to stationary phase in Bacillus subtilis.
Proc Natl Acad Sci U S A: 2008, 105(40);15547-52
[PubMed:18840696] [WorldCat.org] [DOI] (I p)

Anja Petersohn, Haike Antelmann, Ulf Gerth, Michael Hecker
Identification and transcriptional analysis of new members of the sigmaB regulon in Bacillus subtilis.
Microbiology (Reading): 1999, 145 ( Pt 4);869-880
[PubMed:10220166] [WorldCat.org] [DOI] (P p)