Difference between revisions of "YczN"

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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU03789 yczN]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU03789 yczN]
 
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|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' ||
+
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 3.7 kDa, 5.275
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' ||  
+
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 111 bp, 37 aa
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yczM]]'', ''[[yclM]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yczM]]'', ''[[yclM]]''
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=== Basic information ===
 
=== Basic information ===
  
* '''Locus tag:'''
+
* '''Locus tag:''' BSU03789
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===

Revision as of 08:09, 9 November 2012

  • Description: possible toxin

Gene name yczN
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yczN
MW, pI 3.7 kDa, 5.275
Gene length, protein length 111 bp, 37 aa
Immediate neighbours yczM, yclM
Gene sequence (+200bp) Protein sequence
Genetic context
File:YczN context.gif
Expression at a glance   PubMed
500px
























Categories containing this gene/protein

toxins, antitoxins and immunity against toxins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU03789

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: no entry

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Elizabeth M Fozo, Kira S Makarova, Svetlana A Shabalina, Natalya Yutin, Eugene V Koonin, Gisela Storz
Abundance of type I toxin-antitoxin systems in bacteria: searches for new candidates and discovery of novel families.
Nucleic Acids Res: 2010, 38(11);3743-59
[PubMed:20156992] [WorldCat.org] [DOI] (I p)