Difference between revisions of "YcsD"

From SubtiWiki
Jump to: navigation, search
(Expression and regulation)
Line 88: Line 88:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''ycsD'' (according to [http://dbtbs.hgc.jp/COG/prom/ycsD.html DBTBS])
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  
Line 96: Line 96:
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 18:51, 20 August 2009

  • Description: similar to hydroxymyristoyl-(acyl carrier protein) dehydratase

Gene name ycsD
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 14 kDa, 4.687
Gene length, protein length 390 bp, 130 aa
Immediate neighbours yczH, ycsE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcsD context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU04030

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: FabZ subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: ycsD (according to DBTBS)
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References