Difference between revisions of "YcsA"

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=== Basic information ===
 
=== Basic information ===
  
* '''Locus tag:'''
+
* '''Locus tag:''' BSU04000
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
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* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P42958 P42958]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P42958 P42958]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU04000 BSU04000]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU04000]
  
 
* '''E.C. number:''' [http://www.expasy.org/enzyme/1.1.1.93 1.1.1.93]
 
* '''E.C. number:''' [http://www.expasy.org/enzyme/1.1.1.93 1.1.1.93]

Revision as of 12:24, 3 June 2009

  • Description: malic enzyme

Gene name ycsA
Synonyms
Essential no
Product D-malate dehydrogenase (NAD)
Function malic enzyme, links TCA cycle to gluconeogenesis
MW, pI 38 kDa, 5.108
Gene length, protein length 1062 bp, 354 aa
Immediate neighbours mtlD, sipU
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcsA context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU04000

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Tartrate + NAD+ = oxaloglycolate + NADH (according to Swiss-Prot)
  • Protein family: isocitrate and isopropylmalate dehydrogenases family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed