Difference between revisions of "YcnK"

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(References)
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===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
 +
 +
elevated expression of ''[[ycnJ]]'' under conditions of copper excess [http://www.ncbi.nlm.nih.gov/sites/entrez/19168619 PubMed]
  
 
=== Database entries ===
 
=== Database entries ===
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=== Basic information/ Evolution ===
 
=== Basic information/ Evolution ===
  
* '''Catalyzed reaction/ biological activity:'''  
+
* '''Catalyzed reaction/ biological activity:''' repression of ''[[ycnJ]]'' expression [http://www.ncbi.nlm.nih.gov/sites/entrez/19168619 PubMed]
  
 
* '''Protein family:'''
 
* '''Protein family:'''
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* '''Modification:'''
 
* '''Modification:'''
  
* '''Cofactor(s):'''
+
* '''Cofactor(s):''' copper acts as corepressor [http://www.ncbi.nlm.nih.gov/sites/entrez/19168619 PubMed]
  
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''

Revision as of 19:15, 12 March 2009

  • Description: write here

Gene name ycnK
Synonyms
Essential no
Product
Function unknown
MW, pI 21 kDa, 7.371
Gene length, protein length 570 bp, 190 aa
Immediate neighbours ycnJ, ycnL
Gene sequence (+200bp) Protein sequence
Genetic context
YcnK context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

elevated expression of ycnJ under conditions of copper excess PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: repression of ycnJ expression PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s): copper acts as corepressor PubMed
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Chillappagari S, Miethke M, Trip H, Kuipers OP, Marahiel MA (2009) Copper acquisition is mediated by YcnJ and regulated by YcnK and CsoR in Bacillus subtilis. J. Bacteriol. 191: 2362-2370. PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed