Difference between revisions of "YckB"

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* '''[[SubtInteract|Interactions]]:'''
 
* '''[[SubtInteract|Interactions]]:'''
 
** [[YckA]]-[[YckB]] {{PubMed|10092453}}
 
** [[YckA]]-[[YckB]] {{PubMed|10092453}}
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** [[McpC]]-[[YckB]], for chemotaxis to tryptophan {{PubMed|23038252}}
  
 
* '''[[Localization]]:''' associated to the membrane (via [[YckA]]) {{PubMed|10092453}}
 
* '''[[Localization]]:''' associated to the membrane (via [[YckA]]) {{PubMed|10092453}}
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=References=
 
=References=
 
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<pubmed>10092453,23038252, </pubmed>
<pubmed>10092453,, </pubmed>
 
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 16:19, 8 October 2012

Gene name yckB
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yckB
Interactions involving this protein in SubtInteract: YckB
MW, pI 31 kDa, 8.492
Gene length, protein length 861 bp, 287 aa
Immediate neighbours yckA, yckC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YckB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YckB expression.png















Categories containing this gene/protein

ABC transporters, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU03380

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: bacterial solute-binding protein 3 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

George D Glekas, Brendan J Mulhern, Abigail Kroc, Keegan A Duelfer, Victor Lei, Christopher V Rao, George W Ordal
The Bacillus subtilis chemoreceptor McpC senses multiple ligands using two discrete mechanisms.
J Biol Chem: 2012, 287(47);39412-8
[PubMed:23038252] [WorldCat.org] [DOI] (I p)

Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453] [WorldCat.org] [DOI] (P p)