yciB
168
putative L,D-transpeptidase
locus
BSU_03350
Molecular weight
21.94 kDa
pI
6.18
function
unknown
product
putative L,D-transpeptidase
essential
no
synonyms
yciB
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1376 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
365,170 365,754
The protein
Protein family
YkuD family (with [protein|6F256986E591DB82974A7F54EB1CE0C024A6F63B|ldt] and [protein|293794B65B9EEB7F049138F73893303BABFB9A2A|yqjB], according to UniProt)
Structure
[PDB|4LZH] (from Klebsiella pneumoniae, 27% identity)
[AF|C0SP99]
[wiki|Localization]
lipoprotein, cell membrane at the cell poles [Pubmed|20013255]
Biological materials
Mutant
MGNA-B998 (yciB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1997 NBRP B. subtilis, Japan]
BKE03350 ([gene|456AF184261976FAA73359E81443F7035F457D07|yciB]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE03350 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGCAATAATGAATAATGAGA, downstream forward: _UP4_TGAATTGAAAACCGTTGACA
BKK03350 ([gene|456AF184261976FAA73359E81443F7035F457D07|yciB]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK03350 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGCAATAATGAATAATGAGA, downstream forward: _UP4_TGAATTGAAAACCGTTGACA
References
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Time of last update: 2024-04-24 11:04:50
Author of last update: Jstuelk