yceD

168

general stress protein, similar to tellurium resistance protein

locus: BSU_02900

Molecular weight: 20.55 kDa

pI: 4.29

Protein length: 193 aa

Gene length: 582 bp

function: required for survival of ethanol stress

product: unknown

essential: no

synonyms: yceD

List of homologs in different organisms, belongs to COG2310 (Galperin et al., 2021)

Gene

Coordinates: 312,780 → 313,361

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The protein

Protein family

• CAPAB/TerDEXZ family (with [protein|7E4742F30B4C43FBF9DAE0B02948022AE7912A33|yceC] and [protein|863E26D497D29B820912A0C0F4A3AE4C6865EC2E|yceE], according to UniProt)

Structure

• [PDB|2KXT] (from Klebsiella pneumoniae, 59% identity) [pubmed|21112337]
• [AF|P80875]

Paralogous protein(s)

• [protein|7E4742F30B4C43FBF9DAE0B02948022AE7912A33|yceC], [protein|863E26D497D29B820912A0C0F4A3AE4C6865EC2E|yceE]

[wiki|Localization]

• membrane associated [Pubmed|18763711]

Biological materials

Mutant

• MGNA-B984 (yceD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1983 NBRP B. subtilis, Japan]
• BKE02900 (Δ[gene|DF30A8B195B8D830E131B23C768F07BE61F51150|yceD]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE02900 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTTTCATCCACTCCTTT,  downstream forward: _UP4_TAAGACAAATACGAAGAGCA
• BKK02900 (Δ[gene|DF30A8B195B8D830E131B23C768F07BE61F51150|yceD]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK02900 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTTTCATCCACTCCTTT,  downstream forward: _UP4_TAAGACAAATACGAAGAGCA

References

• 15805528,18763711,11866510,18179421,19047346,21112337