Difference between revisions of "YbxG"

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Line 73: Line 73:
 
* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
  
* '''Protein family:''' amino acid-polyamine-organocation (APC) superfamily (according to Swiss-Prot)
+
* '''Protein family:''' secondary amino acid transporter
  
* '''Paralogous protein(s):''' [[AapA]], [[YtnA]], [[YdgF]]
+
* '''Paralogous protein(s):''' [[AapA]], [[GabP]], [[HutM]], [[RocC]], [[RocE]], [[YbgF]], [[YbxG]], [[YdgF]], [[YtnA]], [[YvbW]]
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===

Revision as of 09:48, 13 November 2012

  • Description: similar to amino acid permease

Gene name ybxG
Synonyms ybdP
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ybxG
MW, pI 49 kDa, 9.602
Gene length, protein length 1386 bp, 462 aa
Immediate neighbours ybdO, csgA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YbxG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YbxG expression.png
























Categories containing this gene/protein

transporters/ other, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU02060

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: secondary amino acid transporter

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation: expression activated by glucose (3.7 fold) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Hans-Matti Blencke, Georg Homuth, Holger Ludwig, Ulrike Mäder, Michael Hecker, Jörg Stülke
Transcriptional profiling of gene expression in response to glucose in Bacillus subtilis: regulation of the central metabolic pathways.
Metab Eng: 2003, 5(2);133-49
[PubMed:12850135] [WorldCat.org] [DOI] (P p)