yabD

168

putative metal-dependent hydrolase

locus: BSU_00390

Molecular weight: 29.08 kDa

pI: 4.81

Protein length: 255 aa

Gene length: 768 bp

function: unknown

product: putative metal-dependent hydrolase

essential: no

synonyms: yabD

List of homologs in different organisms, belongs to COG0084 (Galperin et al., 2021)

Gene

Coordinates: 47,706  48,473

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The protein

Protein family

• [wiki|Metallo-dependent hydrolases superfamily] (according to UniProt)

Structure

• [PDB|2GZX] (from Staphylococcus aureus, 64% identity)
• [AF|P37545]

[wiki|Localization]

• cytoplasm (according to UniProt)

Biological materials

Mutant

• MGNA-B904 (yabD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1903 NBRP B. subtilis, Japan]
• BKE00390 ([gene|00798BB5A769C464CC5FDDF7D9E41D30B473B9A8|yabD]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE00390 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATAAGTGAAAAACTCCTTT,  downstream forward: _UP4_TGACAAAAAACGCTAGCGGG
• BKK00390 ([gene|00798BB5A769C464CC5FDDF7D9E41D30B473B9A8|yabD]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK00390 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATAAGTGAAAAACTCCTTT,  downstream forward: _UP4_TGACAAAAAACGCTAGCGGG

References

• 10747959