Difference between revisions of "YabD"

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|colspan="2" | '''Genetic context''' <br/> [[Image:yabD_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yabD_context.gif]]
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yabD_47706_48473_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:yabD_expression.png|500px]]
 
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Revision as of 12:59, 8 August 2012

  • Description: unknown

Gene name yabD
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yabD
MW, pI 29 kDa, 4.807
Gene length, protein length 765 bp, 255 aa
Immediate neighbours metS, yabE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YabD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YabD expression.png
























Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU00390

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

  • The E.coli homolog: ycfH

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: tatD DNase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

M Wexler, F Sargent, R L Jack, N R Stanley, E G Bogsch, C Robinson, B C Berks, T Palmer
TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export.
J Biol Chem: 2000, 275(22);16717-22
[PubMed:10747959] [WorldCat.org] [DOI] (P p)