Difference between revisions of "YaaK"

From SubtiWiki
Jump to: navigation, search
Line 80: Line 80:
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P24281 P24281]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P24281 P24281]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU00200]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU00200]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''

Revision as of 05:21, 25 June 2009

  • Description: unknown

Gene name yaaK
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 11 kDa, 4.536
Gene length, protein length 321 bp, 107 aa
Immediate neighbours dnaX, recR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YaaK context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU00200

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0133 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information: the mRNA is very stable (half-life > 15 min) PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

G Hambraeus, C von Wachenfeldt, L Hederstedt
Genome-wide survey of mRNA half-lives in Bacillus subtilis identifies extremely stable mRNAs.
Mol Genet Genomics: 2003, 269(5);706-14
[PubMed:12884008] [WorldCat.org] [DOI] (P p)