Difference between revisions of "YaaA"

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(New page: * '''Description:''' write here <br/><br/> {| align="right" border="1" cellpadding="2" |- |style="background:#ABCDEF;" align="center"|'''Gene name''' |''genE'' |- |style="background:#ABC...)
 
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* '''Description:''' write here <br/><br/>
 
* '''Description:''' write here <br/><br/>
  
{| align="right" border="1" cellpadding="2"  
+
    {| align="right" border="1" cellpadding="2"  
|-
+
    |-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
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    |style="background:#ABCDEF;" align="center"|'''Gene name'''
|''genE''
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    |''yaaA''
|-
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    |-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
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    |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
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    |-
|style="background:#ABCDEF;" align="center"| '''Essential''' || write here
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    |style="background:#ABCDEF;" align="center"| '''Essential''' ||  
|-
+
    |-
|style="background:#ABCDEF;" align="center"| '''Product''' || write here
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    |style="background:#ABCDEF;" align="center"| '''Product''' ||  
|-
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    |-
|style="background:#ABCDEF;" align="center"|'''Function''' || write here
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    |style="background:#ABCDEF;" align="center"|'''Function''' || unknown
|-
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    |-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || xx,x kDa, y.yy
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    |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 4.332 
|-
+
    |-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || aaa bp, bbb amino acids
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    |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 213 bp, 71 aa
|-
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    |-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[genA]]'', ''[[genB]]''
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    |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||  
|-
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    |-
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
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    |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/yaaA_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_protein.txt Protein sequence]'''
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    |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/yaaA_protein.txt Protein sequence]'''
|-
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    |-
|colspan="2" | '''Genetic context''' <br/> [[Image:genE_context.gif]]
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    |colspan="2" | '''Genetic context''' <br/> [[Image:yaaA_context.gif]]
|-
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    |-
|}
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    |}
  
__TOC__
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    __TOC__
  
<br/><br/>
+
    <br/><br/>
  
=The gene=
+
    =The gene=
  
=== Basic information ===
+
    === Basic information ===
  
* '''Coordinates (CDS):'''
+
    * '''Coordinates:'''
  
===Phenotypes of a mutant ===
+
    ===Phenotypes of a mutant ===
  
=== Database entries ===
+
    === Database entries ===
  
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/rocG.html]
+
    * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yaaA.html]
  
* '''SubtiList entry:'''
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    * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10067]
  
=== Additional information===
+
    === Additional information===
  
  
=The protein=
+
    =The protein=
  
=== Basic information/ Evolution ===
+
    === Basic information/ Evolution ===
  
* '''Catalyzed reaction/ biological activity:'''  
+
    * '''Catalyzed reaction/ biological activity:'''  
  
* '''Protein family:'''
+
    * '''Protein family:'''
  
* '''Paralogous protein(s):'''
+
    * '''Paralogous protein(s):'''
  
=== Extended information on the protein ===
+
    === Extended information on the protein ===
  
* '''Kinetic information:'''
+
    * '''Kinetic information:'''
  
* '''Domains:'''  
+
    * '''Domains:'''  
  
* '''Modification:'''
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    * '''Modification:'''
  
* '''Cofactor(s):'''
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    * '''Cofactor(s):'''
  
* '''Effectors of protein activity:'''
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    * '''Effectors of protein activity:'''
  
* '''Interactions:'''
+
    * '''Interactions:'''
  
* '''Localization:'''
+
    * '''Localization:'''
  
=== Database entries ===
+
    === Database entries ===
  
* '''Structure:'''
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    * '''Structure:'''
  
* '''Swiss prot entry:'''
+
    * '''Swiss prot entry:'''
  
* '''KEGG entry:'''
+
    * '''KEGG entry:'''
  
* '''E.C. number:'''
+
    * '''E.C. number:'''
  
=== Additional information===
+
    === Additional information===
  
=Expression and regulation=
+
    =Expression and regulation=
  
* '''Operon:'''  
+
    * '''Operon:'''  
  
* '''Sigma factor:'''  
+
    * '''Sigma factor:'''  
  
* '''Regulation:'''  
+
    * '''Regulation:'''  
  
* '''Regulatory mechanism:'''  
+
    * '''Regulatory mechanism:'''  
  
* '''Additional information:'''  
+
    * '''Additional information:'''  
  
=Biological materials =
+
    =Biological materials =
  
* '''Mutant:'''
+
    * '''Mutant:'''
  
* '''Expression vector:'''
+
    * '''Expression vector:'''
+
           
* '''lacZ fusion:'''
+
    * '''lacZ fusion:'''
  
* '''GFP fusion:'''
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    * '''GFP fusion:'''
  
* '''two-hybrid system:'''  
+
    * '''two-hybrid system:'''  
  
* '''Antibody:'''
+
    * '''Antibody:'''
  
=Labs working on this gene/protein=
+
    =Labs working on this gene/protein=
  
=Your additional remarks=
+
    =Your additional remarks=
  
=References=
+
    =References=
  
# Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]
+
    # Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]

Revision as of 17:15, 29 January 2009

  • Description: write here

Gene name yaaA
Synonyms
Essential
Product
Function unknown
MW, pI 7 kDa, 4.332
Gene length, protein length 213 bp, 71 aa
Immediate neighbours
Gene sequence (+200bp) Protein sequence
Genetic context
YaaA context.gif


   

   =The gene=
   === Basic information ===
   * Coordinates:
   ===Phenotypes of a mutant ===
   === Database entries ===
   * DBTBS entry: [1]
   * SubtiList entry: [2]
   === Additional information===


   =The protein=
   === Basic information/ Evolution ===
   * Catalyzed reaction/ biological activity: 
   * Protein family:
   * Paralogous protein(s):
   === Extended information on the protein ===
   * Kinetic information:	
   * Domains: 
   * Modification:
   * Cofactor(s):
   * Effectors of protein activity:
   * Interactions:
   * Localization:
   === Database entries ===
   * Structure:	
   * Swiss prot entry:
   * KEGG entry:
   * E.C. number:
   === Additional information===
   =Expression and regulation=
   * Operon: 
   * Sigma factor: 
   * Regulation: 
   * Regulatory mechanism: 
   * Additional information: 
   =Biological materials =
   * Mutant:
   * Expression vector:
           
   * lacZ fusion:
   * GFP fusion:
   * two-hybrid system: 
   * Antibody:
   =Labs working on this gene/protein=
   =Your additional remarks=
   =References=
   # Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed