Difference between revisions of "YaaA"

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* '''Description:''' write here <br/><br/>
 
* '''Description:''' write here <br/><br/>
  
    {| align="right" border="1" cellpadding="2"  
+
{| align="right" border="1" cellpadding="2"  
    |-
+
|-
    |style="background:#ABCDEF;" align="center"|'''Gene name'''
+
|style="background:#ABCDEF;" align="center"|'''Gene name'''
    |''yaaA''
+
|''yaaA''
    |-
+
|-
    |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
+
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
    |-
+
|-
    |style="background:#ABCDEF;" align="center"| '''Essential''' ||  
+
|style="background:#ABCDEF;" align="center"| '''Essential''' ||  
    |-
+
|-
    |style="background:#ABCDEF;" align="center"| '''Product''' ||  
+
|style="background:#ABCDEF;" align="center"| '''Product''' ||  
    |-
+
|-
    |style="background:#ABCDEF;" align="center"|'''Function''' || unknown
+
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
    |-
+
|-
    |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 4.332   
+
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 4.332   
    |-
+
|-
    |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 213 bp, 71 aa  
+
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 213 bp, 71 aa  
    |-
+
|-
    |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||  
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||  
    |-
+
|-
    |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/yaaA_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
+
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/yaaA_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
    |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/yaaA_protein.txt Protein sequence]'''
+
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/yaaA_protein.txt Protein sequence]'''
    |-
+
|-
    |colspan="2" | '''Genetic context''' <br/> [[Image:yaaA_context.gif]]
+
|colspan="2" | '''Genetic context''' <br/> [[Image:yaaA_context.gif]]
    |-
+
|-
    |}
+
|}
  
    __TOC__
+
__TOC__
  
    <br/><br/>
+
<br/><br/>
  
    =The gene=
+
=The gene=
  
    === Basic information ===
+
=== Basic information ===
  
    * '''Coordinates:'''
+
* '''Coordinates:'''
  
    ===Phenotypes of a mutant ===
+
===Phenotypes of a mutant ===
  
    === Database entries ===
+
=== Database entries ===
  
    * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yaaA.html]
+
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yaaA.html]
  
    * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10067]
+
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10067]
  
    === Additional information===
+
=== Additional information===
  
  
    =The protein=
+
=The protein=
  
    === Basic information/ Evolution ===
+
=== Basic information/ Evolution ===
  
    * '''Catalyzed reaction/ biological activity:'''  
+
* '''Catalyzed reaction/ biological activity:'''  
  
    * '''Protein family:'''
+
* '''Protein family:'''
  
    * '''Paralogous protein(s):'''
+
* '''Paralogous protein(s):'''
  
    === Extended information on the protein ===
+
=== Extended information on the protein ===
  
    * '''Kinetic information:'''
+
* '''Kinetic information:'''
  
    * '''Domains:'''  
+
* '''Domains:'''  
  
    * '''Modification:'''
+
* '''Modification:'''
  
    * '''Cofactor(s):'''
+
* '''Cofactor(s):'''
  
    * '''Effectors of protein activity:'''
+
* '''Effectors of protein activity:'''
  
    * '''Interactions:'''
+
* '''Interactions:'''
  
    * '''Localization:'''
+
* '''Localization:'''
  
    === Database entries ===
+
=== Database entries ===
  
    * '''Structure:'''
+
* '''Structure:'''
  
    * '''Swiss prot entry:'''
+
* '''Swiss prot entry:'''
  
    * '''KEGG entry:'''
+
* '''KEGG entry:'''
  
    * '''E.C. number:'''
+
* '''E.C. number:'''
  
    === Additional information===
+
=== Additional information===
  
    =Expression and regulation=
+
=Expression and regulation=
  
    * '''Operon:'''  
+
* '''Operon:'''  
  
    * '''Sigma factor:'''  
+
* '''Sigma factor:'''  
  
    * '''Regulation:'''  
+
* '''Regulation:'''  
  
    * '''Regulatory mechanism:'''  
+
* '''Regulatory mechanism:'''  
  
    * '''Additional information:'''  
+
* '''Additional information:'''  
  
    =Biological materials =
+
=Biological materials =
  
    * '''Mutant:'''
+
* '''Mutant:'''
  
    * '''Expression vector:'''
+
* '''Expression vector:'''
           
+
       
    * '''lacZ fusion:'''
+
* '''lacZ fusion:'''
  
    * '''GFP fusion:'''
+
* '''GFP fusion:'''
  
    * '''two-hybrid system:'''  
+
* '''two-hybrid system:'''  
  
    * '''Antibody:'''
+
* '''Antibody:'''
  
    =Labs working on this gene/protein=
+
=Labs working on this gene/protein=
  
    =Your additional remarks=
+
=Your additional remarks=
  
    =References=
+
=References=
  
    # Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]
+
# Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]

Revision as of 17:22, 29 January 2009

  • Description: write here

Gene name yaaA
Synonyms
Essential
Product
Function unknown
MW, pI 7 kDa, 4.332
Gene length, protein length 213 bp, 71 aa
Immediate neighbours
Gene sequence (+200bp) Protein sequence
Genetic context
YaaA context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed