Difference between revisions of "XkdC"

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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 798 bp, 266 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 798 bp, 266 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[xkdB]]'', ''[[xkdD]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[xkdB]]'', ''[[ykzK]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13110&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13110&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''

Revision as of 10:27, 30 November 2012

  • Description: PBSX prophage

Gene name xkdC
Synonyms ykxC
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: xkdC
MW, pI 30 kDa, 7.967
Gene length, protein length 798 bp, 266 aa
Immediate neighbours xkdB, ykzK
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
XkdC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
XkdC expression.png


























Categories containing this gene/protein

PBSX prophage

This gene is a member of the following regulons

Xre regulon

The gene

Basic information

  • Locus tag: BSU12530

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): YqaM

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Jean-Christophe Meile, Ling Juan Wu, S Dusko Ehrlich, Jeff Errington, Philippe Noirot
Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory.
Proteomics: 2006, 6(7);2135-46
[PubMed:16479537] [WorldCat.org] [DOI] (P p)

G E McDonnell, H Wood, K M Devine, D J McConnell
Genetic control of bacterial suicide: regulation of the induction of PBSX in Bacillus subtilis.
J Bacteriol: 1994, 176(18);5820-30
[PubMed:8083174] [WorldCat.org] [DOI] (P p)