Difference between revisions of "XkdB"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown  
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU12520 xkdB]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU12520 xkdB]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 31 kDa, 10.224   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 31 kDa, 10.224   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjzJ]]'', ''[[xkdC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjzJ]]'', ''[[xkdC]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13109&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU12520 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU12520 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU12520 Advanced_DNA]
 
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|-
 
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Revision as of 12:36, 13 May 2013

  • Description: PBSX prophage

Gene name xkdB
Synonyms ykxB
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: xkdB
MW, pI 31 kDa, 10.224
Gene length, protein length 831 bp, 277 aa
Immediate neighbours yjzJ, xkdC
Sequences Protein DNA Advanced_DNA
Genetic context
XkdB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
XkdB expression.png
























Categories containing this gene/protein

PBSX prophage

This gene is a member of the following regulons

Xre regulon

The gene

Basic information

  • Locus tag: BSU12520

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

G E McDonnell, H Wood, K M Devine, D J McConnell
Genetic control of bacterial suicide: regulation of the induction of PBSX in Bacillus subtilis.
J Bacteriol: 1994, 176(18);5820-30
[PubMed:8083174] [WorldCat.org] [DOI] (P p)