Difference between revisions of "Xis"
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| − | * '''Description:''' | + | * '''Description:''' excisionase<br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
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|style="background:#ABCDEF;" align="center"| '''Essential''' || | |style="background:#ABCDEF;" align="center"| '''Essential''' || | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || excisionase |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || | + | |style="background:#ABCDEF;" align="center"|'''Function''' || excision of conjugative transposon |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 9.64 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 9.64 | ||
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=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
| − | * '''Catalyzed reaction/ biological activity:''' | + | * '''Catalyzed reaction/ biological activity:''' excision of conjugative transposon [http://www.ncbi.nlm.nih.gov/sites/entrez/18005101 PubMed] |
* '''Protein family:''' | * '''Protein family:''' | ||
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=== Additional information=== | === Additional information=== | ||
| + | |||
| + | Was reported to be involved in the regulation of the levansucrase gene (''[[sacB]]'') [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed] | ||
| + | |||
=Expression and regulation= | =Expression and regulation= | ||
Revision as of 10:35, 4 February 2009
- Description: excisionase
| Gene name | xis |
| Synonyms | ydzC, sacV |
| Essential | |
| Product | excisionase |
| Function | excision of conjugative transposon |
| MW, pI | 7 kDa, 9.64 |
| Gene length, protein length | 192 bp, 64 aa |
| Immediate neighbours | |
| Gene sequence (+200bp) | Protein sequence |
Genetic context 
| |
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: excision of conjugative transposon PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- Swiss prot entry:
- KEGG entry:
- E.C. number:
Additional information
Was reported to be involved in the regulation of the levansucrase gene (sacB) PubMed
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
