Difference between revisions of "Upp"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU36890&redirect=T BSU36890] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/upp.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/upp.html] | ||
| Line 96: | Line 97: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU36890&redirect=T BSU36890] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=2EHJ 2EHJ] (from ''Escherichia coli'', 52% identity, 73% similarity) | * '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=2EHJ 2EHJ] (from ''Escherichia coli'', 52% identity, 73% similarity) | ||
Revision as of 16:02, 2 April 2014
- Description: uracil phosphoribosyltransferase
| Gene name | upp |
| Synonyms | ipc-35d |
| Essential | no |
| Product | uracil phosphoribosyltransferase |
| Function | UMP synthesis |
| Gene expression levels in SubtiExpress: upp | |
| Metabolic function and regulation of this protein in SubtiPathways: upp | |
| MW, pI | 22 kDa, 5.863 |
| Gene length, protein length | 627 bp, 209 aa |
| Immediate neighbours | atpI, glyA |
| Gene sequence (+200bp) | Protein sequence |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
biosynthesis/ acquisition of nucleotides
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU36890
Phenotypes of a mutant
Database entries
- BsubCyc: BSU36890
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: UMP + diphosphate = uracil + 5-phospho-alpha-D-ribose 1-diphosphate (according to Swiss-Prot)
- Protein family: UPRTase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU36890
- Structure: 2EHJ (from Escherichia coli, 52% identity, 73% similarity)
- UniProt: P39149
- KEGG entry: [3]
- E.C. number: 2.4.2.9
Additional information
Expression and regulation
- Operon: upp PubMed
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
