Difference between revisions of "TsaD"

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=== Basic information ===
 
=== Basic information ===
  
* '''Locus tag:'''
+
* '''Locus tag:''' BSU05940
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
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* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O05518 O05518]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O05518 O05518]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU05940 BSU05940]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU05940]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''

Revision as of 09:30, 3 June 2009

  • Description: O-sialoglycoprotein endopeptidase (putative)

Gene name gcp
Synonyms ydiE
Essential yes PubMed
Product O-sialoglycoprotein endopeptidase (putative)
Function unknown
MW, pI 36 kDa, 5.016
Gene length, protein length 1038 bp, 346 aa
Immediate neighbours ydiD, ydiF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
Gcp context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU05940

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Hydrolysis of O-sialoglycoproteins; cleaves 31-Arg-|-Asp-32 bond in glycophorin A (according to Swiss-Prot)
  • Protein family: peptidase M22 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions: the corresponding E. coli protein interacts with the proteins corresponding to YdiB and YdiC PubMed
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed