Difference between revisions of "TrmK"
| Line 48: | Line 48: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU25180&redirect=T BSU25180] | ||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
| Line 85: | Line 86: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU25180&redirect=T BSU25180] | ||
* '''Structure:''' | * '''Structure:''' | ||
Revision as of 14:14, 2 April 2014
- Description: tRNA:m1A22 methyl transferase
| Gene name | trmK |
| Synonyms | yqfN |
| Essential | no |
| Product | tRNA:m1A22 methyl transferase |
| Function | tRNA modification |
| Gene expression levels in SubtiExpress: trmK | |
| MW, pI | 23 kDa, 5.272 |
| Gene length, protein length | 648 bp, 216 aa |
| Immediate neighbours | yqfO, cccA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag:
Phenotypes of a mutant
Database entries
- BsubCyc: BSU25180
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylation on Ser-48 PubMed
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU25180
- Structure:
- UniProt: P54471
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Martine Roovers, Katarzyna H Kaminska, Karolina L Tkaczuk, Daniel Gigot, Louis Droogmans, Janusz M Bujnicki
The YqfN protein of Bacillus subtilis is the tRNA: m1A22 methyltransferase (TrmK).
Nucleic Acids Res: 2008, 36(10);3252-62
[PubMed:18420655]
[WorldCat.org]
[DOI]
(I p)
Boris Macek, Ivan Mijakovic, Jesper V Olsen, Florian Gnad, Chanchal Kumar, Peter R Jensen, Matthias Mann
The serine/threonine/tyrosine phosphoproteome of the model bacterium Bacillus subtilis.
Mol Cell Proteomics: 2007, 6(4);697-707
[PubMed:17218307]
[WorldCat.org]
[DOI]
(P p)
