Difference between revisions of "Transporters/ other"

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(Genes in this functional category)
(Other exporters)
 
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{{CategoryTree
 
{{CategoryTree
 
|Parents=
 
|Parents=
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* 1.2.1. [[ABC transporters]]
 
* 1.2.1. [[ABC transporters]]
 
* 1.2.2. [[Phosphotransferase systems]]
 
* 1.2.2. [[Phosphotransferase systems]]
* 1.2.3. [[Transporters/ other]]
+
* 1.2.3. [[ECF transporter]]
 +
* 1.2.4. [[Transporters/ other]]
 
|Related=
 
|Related=
none
+
* [[transport proteins]]
 +
* [[APC superfamily of transport proteins]]
 
|}}
 
|}}
  
 +
== Important web site: [http://www.tcdb.org The transporter classification database] ==
 
== Genes in this functional category ==
 
== Genes in this functional category ==
* [[aapA]]
+
 
* [[alsT]]
+
===Amino acid transporters ===
* [[araE]]
+
==== solute:sodium symporter family ====
* [[arsB]]
+
* ''[[gltT]]''
* [[aseA]]
+
* ''[[opuE]]''
* [[azlC]]
+
* ''[[putP]]''
* [[azlD]]
+
* ''[[yodF]]''
* [[bcaP]]
+
* ''[[ywcA]]''
* [[blt]]
+
==== Other amino acid transporters ====
* [[bmr]]
+
* ''[[aapA]]''
* [[braB]]
+
* ''[[azlC]]''
* [[brnQ]]
+
* ''[[azlD]]''
* [[cadA]]
+
* ''[[bcaP]]''
* [[chaA]]
+
* ''[[braB]]''
* [[cimH]]
+
* ''[[brnQ]]''
* [[citH]]
+
* ''[[cysP]]''
* [[citM]]
+
* ''[[glnT]]''
* [[copA]]
+
* ''[[gltP]]''
* [[copZ]]
+
 
* [[corA]]
+
* ''[[hutM]]''
* [[csbC]]
+
* ''[[rocC]]''
* [[cysP]]
+
* ''[[rocE]]''
* [[czcD]]
+
* ''[[steT]]''
* [[dctB]]
+
* ''[[tcyP]]''
* [[dctP]]
+
* ''[[ybgF]]''
* [[dltB]]
+
* ''[[ybxG]]''
* [[ebrA]]
+
* ''[[ydgF]]''
* [[ebrB]]
+
* ''[[yrbD]]''
* [[exuT]]
+
* ''[[ytnA]]''
* [[gabP]]
+
* ''[[yvbW]]''
* [[glcP]]
+
* ''[[yveA]]''
* [[glcU]]
+
 
* [[glnT]]
+
===Peptide transporter===
* [[glpF]]
+
* ''[[dtpT]]''
* [[glpT]]
+
 
* [[gltP]]
+
===Carbohydrate transporter===
* [[gltT]]
+
* ''[[araE]]''
* [[gntP]]
+
* ''[[exuT]]''
* [[gutP]]
+
* ''[[glcP]]''
* [[hutM]]
+
* ''[[glcU]]''
* [[iolF]]
+
* ''[[glpF]]''
* [[iolT]]
+
* ''[[glpT]]''
* [[kdgT]]
+
* ''[[gntP]]''
* [[ktrA]]
+
* ''[[gutP]]''
* [[ktrB]]
+
* ''[[iolF]]''
* [[ktrC]]
+
* ''[[iolT]]''
* [[ktrD]]
+
* ''[[kdgT]]''
* [[lctP]]
+
* ''[[mdtP]]''
* [[lmrB]]
+
* ''[[xynP]]''
* [[lutP]]
+
* ''[[ycbE]]''
* [[maeN]]
+
* ''[[yfiG]]''
* [[mdr]]
+
* ''[[yjmB]]''
* [[mdtP]]
+
 
* [[mgtE]]
+
===Transporter for organic acids===
* [[mleN]]
+
* ''[[alsT]]''
* [[mntH]]
+
* ''[[cimH]]''
* [[mrpA]]
+
* ''[[citH]]''
* [[mrpB]]
+
* ''[[citM]]''
* [[mrpC]]
+
* ''[[dctP]]''
* [[mrpD]]
+
* ''[[gabP]]''
* [[mrpE]]
+
* ''[[lctP]]''
* [[mrpF]]
+
* ''[[lutP]]''
* [[mrpG]]
+
* ''[[maeN]]''
* [[narK]]
+
* ''[[mleN]]''
* [[nasA]]
+
* ''[[ybaR]]''
* [[nhaC]]
+
* ''[[yflS]]''
* [[nhaK]]
+
* ''[[yoaB]]''
* [[nrgA]]
+
* ''[[yraO]]''
* [[nupC]]
+
* ''[[ysbA]]''
* [[nupG]]
+
 
* [[opuD]]
+
===Metal ion transporter===
* [[opuE]]
+
* ''[[arsB]]''
* [[pbuE]]
+
* ''[[aseA]]''
* [[pbuG]]
+
* ''[[cadA]]''
* [[pbuO]]
+
* ''[[chaA]]''
* [[pbuX]]
+
* ''[[copA]]''
* [[pit]]
+
* ''[[copZ]]''
* [[pucI]]
+
* ''[[corA]]''
* [[pucJ]]
+
* ''[[czcD]]''
* [[pucK]]
+
* [[EfeO]]-[[EfeU]]
* [[pyrP]]
+
* [[KhtT]]-[[KhtU]]
* [[ribU]]
+
* [[KtrA]]-[[KtrB]]
* [[rocC]]
+
* [[KtrC]]-[[KtrD]]
* [[rocE]]
+
* ''[[mgtE]]''
* [[steT]]
+
* ''[[mntH]]''
* [[tcyP]]
+
* ''[[mrpA]]''
* [[tetB]]
+
* ''[[mrpB]]''
* [[thiT]]
+
* ''[[mrpC]]''
* [[trkA]]
+
* ''[[mrpD]]''
* [[trpP]]
+
* ''[[mrpE]]''
* [[ybaS]]
+
* ''[[mrpF]]''
* [[ybcL]]
+
* ''[[mrpG]]''
* [[ybeC]]
+
* ''[[nhaC]]''
* [[ybgF]]
+
* ''[[nhaK]]''
* [[ybxG]]
+
* ''[[pfeT]]''
* [[ycbE]]
+
* ''[[yciB]]''
* [[ycbK]]
+
* ''[[ycnJ]]''
* [[yccK]]
+
* ''[[yfjQ]]''
* [[yceI]]
+
* ''[[yugO]]''
* [[yceJ]]
+
===Nucleotide/ nucleoside transporter===
* [[ycgH]]
+
* ''[[nupC]]''
* [[ycgO]]
+
* ''[[nupG]]''
* [[yciB]]
+
* ''[[pbuE]]''
* [[yclF]]
+
* ''[[pbuG]]''
* [[ycnB]]
+
* ''[[pbuO]]''
* [[ycnJ]]
+
* ''[[pbuX]]''
* [[ycsG]]
+
* ''[[pucI]]''
* [[ydbO]]
+
* ''[[pucJ]]''
* [[yddS]]
+
* ''[[pucK]]''
* [[ydeG]]
+
* ''[[pyrP]]''
* [[ydeR]]
+
 
* [[ydfM]]
+
===Transporter for cofactors===
* [[ydgF]]
+
* ''[[niaP]]''
* [[ydgH]]
+
 
* [[ydgK]]
+
=== Uptake of other small ions ===
* [[yeaB]]
+
* ''[[nasA]]''
* [[yecA]]
+
* ''[[nrgA]]''
* [[yfhI]]
+
* ''[[pit]]''
* [[yfiG]]
+
*'' [[yqeW]]''
* [[yfiS]]
+
 
* [[yfiU]]
+
=== Uptake of compatible solutes ===
* [[yfjQ]]
+
* ''[[opuD]]''
* [[yfkF]]
+
* ''[[opuE]]''
* [[yfkL]]
+
 
* [[yflA]]
+
=== Siderophore exporters ===
* [[yflS]]
+
* ''[[ymfD]]''
* [[yfmI]]
+
 
* [[yfmO]]
+
=== Metal ion exporters ===
* [[yfnA]]
+
* ''[[mneP]]''
* [[yhaT]]
+
* ''[[mneS]]''
* [[yhaU]]
+
 
* [[yhcA]]
+
=== Multidrug exporters ===
* [[yhdG]]
+
* ''[[ebrA]]''
* [[yhdH]]
+
* ''[[ebrB]]''
* [[yhjB]]
+
* ''[[yvaD]]''
* [[yhjO]]
+
* ''[[yvaE]]''
* [[yitG]]
+
* ''[[yvdR]]''
* [[yitZ]]
+
* ''[[yvdS]]''
* [[yjbB]]
+
 
* [[yjbQ]]
+
=== Other exporters ===
* [[yjmB]]
+
* ''[[blt]]''
* [[ykuC]]
+
* ''[[bmr]]''
* [[yloB]]
+
* ''[[epsK]]''
* [[ymfD]]
+
* ''[[mdr]]''
* [[yncC]]
+
* ''[[narK]]''
* [[yoaB]]
+
* ''[[trkA]]''
* [[yoaV]]
+
* ''[[ykkC]]''
* [[yocN]]
+
* ''[[ykkD]]''
* [[yocR]]
+
* ''[[ywrA]]''
* [[yocS]]
+
* ''[[ywrB]]''
* [[yodF]]
+
 
* [[yojA]]
+
===Other transporters===
* [[ypnP]]
+
* ''[[csbC]]''
* [[yqeW]]
+
* ''[[cstA]]''
* [[yqjV]]
+
* ''[[dltB]]''
* [[yraO]]
+
* ''[[lmrB]]''
* [[yrbD]]
+
* ''[[tetB]]''
* [[yrhG]]
+
* ''[[ybaS]]''
* [[yrhP]]
+
* ''[[ybcL]]''
* [[ytbD]]
+
* ''[[ybeC]]''
* [[ytnA]]
+
 
* [[ytoA]]
+
* ''[[ycbK]]''
* [[yttB]]
+
 
* [[yubD]]
+
* ''[[yceJ]]''
* [[yugO]]
+
*'' [[ycgH]]''
* [[yutK]]
+
 
* [[yuxJ]]
+
* ''[[ycnB]]''
* [[yvaE]]
+
* ''[[ycsG]]''
* [[yvbV]]
+
* ''[[ydbO]]''
* [[yvbW]]
+
* ''[[yddS]]''
* [[yvdB]]
+
* ''[[ydeG]]''
* [[yveA]]
+
* ''[[ydeR]]''
* [[yvgK]]
+
 
* [[yvkA]]
+
* ''[[ydgH]]''
* [[yvmA]]
+
* ''[[ydgK]]''
* [[yvqJ]]
+
 
* [[yvsH]]
+
* ''[[yecA]]''
* [[ywbL]]
+
* ''[[yfhI]]''
* [[ywbM]]
+
* ''[[yfiS]]''
* [[ywbN]]
+
* ''[[yfiU]]''
* [[ywcA]]
+
* ''[[yfkF]]''
* [[ywcJ]]
+
* ''[[yfkL]]''
* [[ywoD]]
+
* ''[[yflA]]''
* [[ywrB]]
+
* ''[[yfmI]]''
* [[ywrK]]
+
* ''[[yfmO]]''
* [[ywtG]]
+
* ''[[yfnA]]''
* [[yxaH]]
+
* ''[[yhcA]]''
* [[yxeR]]
+
* ''[[yhdH]]''
* [[yxlA]]
+
* ''[[yhjB]]''
* [[yxlH]]
+
* ''[[yhjO]]''
* [[yybF]]
+
* ''[[yitG]]''
* [[yybO]]
+
* ''[[yitZ]]''
* [[yycB]]
+
* ''[[yjbB]]''
* [[zosA]]
+
* ''[[yjbQ]]''
 +
* ''[[ykuC]]''
 +
* ''[[yloB]]''
 +
* ''[[yncC]]''
 +
* ''[[yoaV]]''
 +
* ''[[yocN]]''
 +
* ''[[yocR]]''
 +
* ''[[yocS]]''
 +
 
 +
* ''[[yojA]]''
 +
* ''[[ypnP]]''
 +
* ''[[yqjV]]''
 +
* ''[[yrhG]]''
 +
* ''[[yrhP]]''
 +
* ''[[ytbD]]''
 +
 
 +
* ''[[ytoA]]''
 +
* ''[[yttB]]''
 +
* ''[[yubD]]''
 +
 
 +
* ''[[yutK]]''
 +
* ''[[yuxJ]]''
 +
 
 +
* ''[[yvbV]]''
 +
 
 +
* ''[[yvdB]]''
 +
* ''[[yvgK]]''
 +
* ''[[yvgT]]''
 +
* ''[[yvkA]]''
 +
* ''[[yvmA]]''
 +
* ''[[yvqJ]]''
 +
* ''[[yvsH]]''
 +
* ''[[ywcJ]]''
 +
* ''[[ywoD]]''
 +
* ''[[ywrK]]''
 +
* ''[[ywtG]]''
 +
* ''[[yxaH]]''
 +
* ''[[yxeR]]''
 +
* ''[[yxlA]]''
 +
* ''[[yxlH]]''
 +
* ''[[yybF]]''
 +
* ''[[yybO]]''
 +
* ''[[yycB]]''
 +
 
 +
=Relevant publications=
 +
<pubmed> 20497229 11763970 15247498 10839820 12787345 10943556 9529885 24225317 </pubmed>
 +
 
 +
=Back to [[categories]]=

Latest revision as of 08:56, 22 December 2016

Parent categories
Neighbouring categories
Related categories

Important web site: The transporter classification database

Genes in this functional category

Amino acid transporters

solute:sodium symporter family

Other amino acid transporters

Peptide transporter

Carbohydrate transporter

Transporter for organic acids

Metal ion transporter

Nucleotide/ nucleoside transporter

Transporter for cofactors

Uptake of other small ions

Uptake of compatible solutes

Siderophore exporters

Metal ion exporters

Multidrug exporters

Other exporters

Other transporters

Relevant publications

Milton H Saier, Vamsee S Reddy, Dorjee G Tamang, Ake Västermark
The transporter classification database.
Nucleic Acids Res: 2014, 42(Database issue);D251-8
[PubMed:24225317] [WorldCat.org] [DOI] (I p)

Thomas Eitinger, Dmitry A Rodionov, Mathias Grote, Erwin Schneider
Canonical and ECF-type ATP-binding cassette importers in prokaryotes: diversity in modular organization and cellular functions.
FEMS Microbiol Rev: 2011, 35(1);3-67
[PubMed:20497229] [WorldCat.org] [DOI] (I p)

Wolfgang Busch, Milton H Saier, International Union of Biochemistry and Molecular Biology (IUBMB)
The IUBMB-endorsed transporter classification system.
Mol Biotechnol: 2004, 27(3);253-62
[PubMed:15247498] [WorldCat.org] [DOI] (P p)

Milton H Saier
Tracing pathways of transport protein evolution.
Mol Microbiol: 2003, 48(5);1145-56
[PubMed:12787345] [WorldCat.org] [DOI] (P p)

Milton H Saier, Seth R Goldman, Randal R Maile, Matthew S Moreno, Walter Weyler, Nelson Yang, Ian T Paulsen
Transport capabilities encoded within the Bacillus subtilis genome.
J Mol Microbiol Biotechnol: 2002, 4(1);37-67
[PubMed:11763970] [WorldCat.org] (P p)

M H Saier, J T Beatty, A Goffeau, K T Harley, W H Heijne, S C Huang, D L Jack, P S Jähn, K Lew, J Liu, S S Pao, I T Paulsen, T T Tseng, P S Virk
The major facilitator superfamily.
J Mol Microbiol Biotechnol: 1999, 1(2);257-79
[PubMed:10943556] [WorldCat.org] (P p)

M H Saier
A functional-phylogenetic classification system for transmembrane solute transporters.
Microbiol Mol Biol Rev: 2000, 64(2);354-411
[PubMed:10839820] [WorldCat.org] [DOI] (P p)

S S Pao, I T Paulsen, M H Saier
Major facilitator superfamily.
Microbiol Mol Biol Rev: 1998, 62(1);1-34
[PubMed:9529885] [WorldCat.org] [DOI] (P p)


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