Difference between revisions of "Translation"
(→Rrna modification and maturation/ based on similarity) |
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| − | |||
{{CategoryTree | {{CategoryTree | ||
|Parents= | |Parents= | ||
| Line 11: | Line 10: | ||
* 3.3.5. [[Proteolysis]] | * 3.3.5. [[Proteolysis]] | ||
|Related= | |Related= | ||
| − | + | * [[ribosomal proteins]] | |
| + | * [[ribosomal RNA]] | ||
| + | * [[5S rRNA]] | ||
| + | * [[16S rRNA]] | ||
| + | * [[23S rRNA]] | ||
|}} | |}} | ||
== Genes in this functional category == | == Genes in this functional category == | ||
| − | === Ribosomal | + | === [[Ribosomal RNA]]=== |
* ''[[rrnA-16S]]'' | * ''[[rrnA-16S]]'' | ||
* ''[[rrnA-23S]]'' | * ''[[rrnA-23S]]'' | ||
| Line 48: | Line 51: | ||
* ''[[rrnW-5S]]'' | * ''[[rrnW-5S]]'' | ||
| − | === | + | === rRNA modification and maturation === |
| − | |||
* ''[[ksgA]]'' | * ''[[ksgA]]'' | ||
* ''[[mrnC]]'' | * ''[[mrnC]]'' | ||
* ''[[rimM]]'' | * ''[[rimM]]'' | ||
| + | * ''[[rlmCD]]'' | ||
* ''[[rluB]]'' | * ''[[rluB]]'' | ||
* ''[[rnc]]'' | * ''[[rnc]]'' | ||
| Line 62: | Line 65: | ||
* ''[[ysgA]]'' | * ''[[ysgA]]'' | ||
| − | === | + | === rRNA modification and maturation/ based on similarity === |
| − | |||
| − | |||
| − | |||
* ''[[yabC]]'' | * ''[[yabC]]'' | ||
* ''[[ylbH]]'' | * ''[[ylbH]]'' | ||
| + | * ''[[ylbN]]'' | ||
| + | * ''[[yloM]]'' | ||
* ''[[yloN]]'' | * ''[[yloN]]'' | ||
* ''[[ypsC]]'' | * ''[[ypsC]]'' | ||
| + | * ''[[yrrK]]'' | ||
| + | * ''[[ytzG]]'' | ||
| + | * ''[[yydA]]'' | ||
=== Ribosomal proteins === | === Ribosomal proteins === | ||
| Line 103: | Line 108: | ||
* ''[[rpmGA]]'' | * ''[[rpmGA]]'' | ||
* ''[[rpmGB]]'' | * ''[[rpmGB]]'' | ||
| + | * ''[[rpmGC]]'' | ||
* ''[[rpmH]]'' | * ''[[rpmH]]'' | ||
* ''[[rpmI]]'' | * ''[[rpmI]]'' | ||
| Line 127: | Line 133: | ||
* ''[[rpsU]]'' | * ''[[rpsU]]'' | ||
* ''[[ybxF]]'' | * ''[[ybxF]]'' | ||
| − | * ''[[ | + | * ''[[rpsNB]]'' |
| − | * ''[[ | + | * ''[[rpmEB]]'' |
=== Ribosomal protein/ based on similarity === | === Ribosomal protein/ based on similarity === | ||
| Line 137: | Line 143: | ||
=== Ribosome assembly === | === Ribosome assembly === | ||
* ''[[cpgA]]'' | * ''[[cpgA]]'' | ||
| + | * ''[[cshA]]'' | ||
| + | * ''[[cshB]]'' | ||
| + | * ''[[engA]]'' | ||
* ''[[era]]'' | * ''[[era]]'' | ||
* ''[[obg]]'' | * ''[[obg]]'' | ||
| + | * ''[[prp]]'' | ||
* ''[[rbgA]]'' | * ''[[rbgA]]'' | ||
| − | * ''[[ | + | * ''[[yaaA]]'' |
| + | * ''[[yfmL]]'' | ||
* ''[[yqeH]]'' | * ''[[yqeH]]'' | ||
* ''[[ysxC]]'' | * ''[[ysxC]]'' | ||
| − | === | + | === tRNA === |
* ''[[trnA-Ala]]'' | * ''[[trnA-Ala]]'' | ||
* ''[[trnA-Ile]]'' | * ''[[trnA-Ile]]'' | ||
| Line 232: | Line 243: | ||
* ''[[trnY-Phe]]'' | * ''[[trnY-Phe]]'' | ||
| − | === | + | === tRNA modification and maturation === |
* ''[[cca]]'' | * ''[[cca]]'' | ||
| + | * ''[[cspR]]'' | ||
* ''[[fmt]]'' | * ''[[fmt]]'' | ||
* ''[[folD]]'' | * ''[[folD]]'' | ||
* ''[[gidA]]'' | * ''[[gidA]]'' | ||
* ''[[miaA]]'' | * ''[[miaA]]'' | ||
| + | * ''[[mtaB]]'' | ||
| + | |||
| + | * ''[[nifZ]]'' | ||
* ''[[queA]]'' | * ''[[queA]]'' | ||
* ''[[queC]]'' | * ''[[queC]]'' | ||
| Line 243: | Line 258: | ||
* ''[[queE]]'' | * ''[[queE]]'' | ||
* ''[[queF]]'' | * ''[[queF]]'' | ||
| + | * ''[[queG]]'' | ||
* ''[[rnpA]]'' | * ''[[rnpA]]'' | ||
* ''[[rnpB]]'' | * ''[[rnpB]]'' | ||
* ''[[rnz]]'' | * ''[[rnz]]'' | ||
* ''[[rph]]'' | * ''[[rph]]'' | ||
| + | * ''[[tcdA]]'' | ||
* ''[[tgt]]'' | * ''[[tgt]]'' | ||
* ''[[thdF]]'' | * ''[[thdF]]'' | ||
| + | * ''[[thiI]]'' | ||
* ''[[tilS]]'' | * ''[[tilS]]'' | ||
* ''[[trmB]]'' | * ''[[trmB]]'' | ||
| Line 257: | Line 275: | ||
* ''[[truA]]'' | * ''[[truA]]'' | ||
* ''[[truB]]'' | * ''[[truB]]'' | ||
| + | * ''[[tsaB]]'' | ||
| + | * ''[[tsaC]]'' | ||
| + | * ''[[tsaD]]'' | ||
| + | * ''[[tsaE]]'' | ||
* ''[[yaaJ]]'' | * ''[[yaaJ]]'' | ||
* ''[[yacF]]'' | * ''[[yacF]]'' | ||
* ''[[yfjN]]'' | * ''[[yfjN]]'' | ||
| + | * ''[[ylbM]]'' | ||
* ''[[ymcB]]'' | * ''[[ymcB]]'' | ||
| − | |||
| − | |||
| − | === Aminoacyl- | + | * ''[[yrvO]]'' |
| + | |||
| + | === tRNA modification and maturation/ based on similarity === | ||
| + | * ''[[yjdI]]'' | ||
| + | |||
| + | === Aminoacyl-tRNA synthetases === | ||
* ''[[alaS]]'' | * ''[[alaS]]'' | ||
* ''[[argS]]'' | * ''[[argS]]'' | ||
| Line 293: | Line 319: | ||
* ''[[valS]]'' | * ''[[valS]]'' | ||
* ''[[ytpR]]'' | * ''[[ytpR]]'' | ||
| + | |||
| + | ==== [http://www.rcsb.org/pdb/101/motm.do?momID=16 Discussion of the structure of aminoacyl-tRNA synthetases] ==== | ||
=== Translation factors === | === Translation factors === | ||
| Line 301: | Line 329: | ||
* ''[[infB]]'' | * ''[[infB]]'' | ||
* ''[[infC]]'' | * ''[[infC]]'' | ||
| + | * ''[[lepA]]'' | ||
* ''[[prfA]]'' | * ''[[prfA]]'' | ||
* ''[[prfB]]'' | * ''[[prfB]]'' | ||
| Line 310: | Line 339: | ||
=== Translation/ other === | === Translation/ other === | ||
* ''[[deaD]]'' | * ''[[deaD]]'' | ||
| − | * ''[[ | + | * ''[[defA]]'' |
| + | * ''[[dtd]]'' | ||
* ''[[map]]'' | * ''[[map]]'' | ||
* ''[[mifM]]'' | * ''[[mifM]]'' | ||
| Line 317: | Line 347: | ||
* ''[[ssrA]]'' | * ''[[ssrA]]'' | ||
* ''[[yflG]]'' | * ''[[yflG]]'' | ||
| − | * ''[[ | + | * ''[[ynbA]]'' |
| + | * ''[[yqeL]]'' | ||
* ''[[yqeT]]'' | * ''[[yqeT]]'' | ||
=== Translation/ other/ based on similarity === | === Translation/ other/ based on similarity === | ||
| + | * ''[[yabO]]'' | ||
* ''[[ydiD]]'' | * ''[[ydiD]]'' | ||
| − | |||
* ''[[yfjO]]'' | * ''[[yfjO]]'' | ||
* ''[[yjbO]]'' | * ''[[yjbO]]'' | ||
* ''[[yjcK]]'' | * ''[[yjcK]]'' | ||
| + | * ''[[ylxS]]'' | ||
* ''[[ylyB]]'' | * ''[[ylyB]]'' | ||
* ''[[ynaD]]'' | * ''[[ynaD]]'' | ||
* ''[[yoaA]]'' | * ''[[yoaA]]'' | ||
| − | * ''[[ | + | * ''[[yqeI]]'' |
| + | * ''[[ywkE]]'' | ||
| + | |||
| + | |||
| + | = Important publications= | ||
| + | <pubmed>22456704 22848659 22905870 24809820 24789973 25796611 26518335 28271488</pubmed> | ||
| + | |||
| + | =Back to [[categories]]= | ||
Latest revision as of 09:31, 5 October 2018
| Parent categories | |
| Neighbouring categories |
|
| Related categories | |
Contents
- 1 Genes in this functional category
- 1.1 Ribosomal RNA
- 1.2 rRNA modification and maturation
- 1.3 rRNA modification and maturation/ based on similarity
- 1.4 Ribosomal proteins
- 1.5 Ribosomal protein/ based on similarity
- 1.6 Ribosome assembly
- 1.7 tRNA
- 1.8 tRNA modification and maturation
- 1.9 tRNA modification and maturation/ based on similarity
- 1.10 Aminoacyl-tRNA synthetases
- 1.11 Translation factors
- 1.12 Translation/ other
- 1.13 Translation/ other/ based on similarity
- 2 Important publications
- 3 Back to categories
Genes in this functional category
Ribosomal RNA
- rrnA-16S
- rrnA-23S
- rrnA-5S
- rrnB-16S
- rrnB-23S
- rrnB-5S
- rrnD-16S
- rrnD-23S
- rrnD-5S
- rrnE-16S
- rrnE-23S
- rrnE-5S
- rrnG-16S
- rrnG-23S
- rrnG-5S
- rrnH-16S
- rrnH-23S
- rrnH-5S
- rrnI-16S
- rrnI-23S
- rrnI-5S
- rrnJ-16S
- rrnJ-23S
- rrnJ-5S
- rrnO-16S
- rrnO-23S
- rrnO-5S
- rrnW-16S
- rrnW-23S
- rrnW-5S
rRNA modification and maturation
rRNA modification and maturation/ based on similarity
Ribosomal proteins
- ctc
- rplA
- rplB
- rplC
- rplD
- rplE
- rplF
- rplI
- rplJ
- rplK
- rplL
- rplM
- rplN
- rplO
- rplP
- rplQ
- rplR
- rplS
- rplT
- rplU
- rplV
- rplW
- rplX
- rpmA
- rpmB
- rpmC
- rpmD
- rpmE
- rpmF
- rpmGA
- rpmGB
- rpmGC
- rpmH
- rpmI
- rpmJ
- rpsB
- rpsC
- rpsD
- rpsE
- rpsF
- rpsG
- rpsH
- rpsI
- rpsJ
- rpsK
- rpsL
- rpsM
- rpsN
- rpsO
- rpsP
- rpsQ
- rpsR
- rpsS
- rpsT
- rpsU
- ybxF
- rpsNB
- rpmEB
Ribosomal protein/ based on similarity
Ribosome assembly
tRNA
- trnA-Ala
- trnA-Ile
- trnB-Ala
- trnB-Arg
- trnB-Asn
- trnB-Asp
- trnB-Glu
- trnB-Gly1
- trnB-Gly2
- trnB-His
- trnB-Ile2
- trnB-Leu1
- trnB-Leu2
- trnB-Lys
- trnB-Met1
- trnB-Met2
- trnB-Met3
- trnB-Phe
- trnB-Pro
- trnB-Ser1
- trnB-Ser2
- trnB-Thr
- trnB-Val
- trnD-Asn
- trnD-Asp
- trnD-Cys
- trnD-Gln
- trnD-Glu
- trnD-Gly
- trnD-His
- trnD-Leu1
- trnD-Leu2
- trnD-Met
- trnD-Phe
- trnD-Ser
- trnD-Thr
- trnD-Trp
- trnD-Tyr
- trnD-Val
- trnE-Arg
- trnE-Asp
- trnE-Gly
- trnE-Met
- trnI-Ala
- trnI-Arg
- trnI-Asn
- trnI-Gly
- trnI-Pro
- trnI-Thr
- trnJ-Ala
- trnJ-Arg
- trnJ-Gly
- trnJ-Leu1
- trnJ-Leu2
- trnJ-Lys
- trnJ-Pro
- trnJ-Thr
- trnJ-Val
- trnO-Ala
- trnO-Ile
- trnQ-Arg
- trnS-Asn
- trnS-Gln
- trnS-Glu
- trnS-Leu1
- trnS-Leu2
- trnS-Lys
- trnS-Ser
- trnSL-Ala1
- trnSL-Arg1
- trnSL-Arg2
- trnSL-Gln1
- trnSL-Gln2
- trnSL-Glu1
- trnSL-Glu2
- trnSL-Gly1
- trnSL-Met1
- trnSL-Ser1
- trnSL-Thr1
- trnSL-Tyr1
- trnSL-Val1
- trnSL-Val2
- trnY-Asp
- trnY-Glu
- trnY-Lys
- trnY-Phe
tRNA modification and maturation
- nifZ
- queA
- queC
- queD
- queE
- queF
- queG
- rnpA
- rnpB
- rnz
- rph
- tcdA
- tgt
- thdF
- thiI
- tilS
- trmB
- trmD
- trmFO
- trmK
- trmU
- truA
- truB
- tsaB
- tsaC
- tsaD
- tsaE
- yaaJ
- yacF
- yfjN
- ylbM
- ymcB
tRNA modification and maturation/ based on similarity
Aminoacyl-tRNA synthetases
- alaS
- argS
- asnS
- aspS
- cysS
- gatA
- gatB
- gatC
- gltX
- glyQ
- glyS
- hisS
- hisZ
- ileS
- leuS
- lysS
- metS
- pheS
- pheT
- proS
- serS
- thrS
- thrZ
- trpS
- tyrS
- tyrZ
- valS
- ytpR
Discussion of the structure of aminoacyl-tRNA synthetases
Translation factors
Translation/ other
Translation/ other/ based on similarity
Important publications
