Difference between revisions of "TnrA regulon"
(→Repression) |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 7: | Line 7: | ||
=== Activation === | === Activation === | ||
* ''[[ansZ]]'' | * ''[[ansZ]]'' | ||
| + | * ''[[appD]]-[[appF]]-[[appA]]-[[appB]]-[[appC]]'' | ||
| + | * ''[[dtpT]]'' | ||
* ''[[gabP]]'' | * ''[[gabP]]'' | ||
* ''[[glnQ]]-[[glnH]]-[[glnM]]-[[glnP]]'' | * ''[[glnQ]]-[[glnH]]-[[glnM]]-[[glnP]]'' | ||
| Line 14: | Line 16: | ||
* ''[[oppA]]-[[oppB]]-[[oppC]]-[[oppD]]-[[oppF]]'' | * ''[[oppA]]-[[oppB]]-[[oppC]]-[[oppD]]-[[oppF]]'' | ||
* ''[[pucJ]]-[[pucK]]-[[pucL]]-[[pucM]]'' | * ''[[pucJ]]-[[pucK]]-[[pucL]]-[[pucM]]'' | ||
| + | * ''[[pucR]]'' | ||
* ''[[tnrA]]'' | * ''[[tnrA]]'' | ||
* ''[[ureA]]-[[ureB]]-[[ureC]]'' | * ''[[ureA]]-[[ureB]]-[[ureC]]'' | ||
* ''[[ycsF]]-[[ycsG]]-[[ycsI]]-[[kipI]]-[[kipA]]-[[kipR]]-[[lipC]]'' | * ''[[ycsF]]-[[ycsG]]-[[ycsI]]-[[kipI]]-[[kipA]]-[[kipR]]-[[lipC]]'' | ||
| − | * ''[[ykoL]]'' | + | * ''[[yfiR]]'' |
| − | * ''[[ | + | * ''[[ykzB]]-[[ykoL]]'' |
| + | * ''[[yrbD]]'' | ||
| + | * ''[[ysnD]]'' | ||
* ''[[ywrD]]'' | * ''[[ywrD]]'' | ||
* ''[[yxkC]]'' | * ''[[yxkC]]'' | ||
| Line 27: | Line 32: | ||
* ''[[glnR]]-[[glnA]]'' | * ''[[glnR]]-[[glnA]]'' | ||
* ''[[gltA]]-[[gltB]]'' | * ''[[gltA]]-[[gltB]]'' | ||
| + | * ''[[hom]]'' | ||
* ''[[ilvB]]-[[ilvH]]-[[ilvC]]-[[leuA]]-[[leuB]]-[[leuC]]-[[leuD]]'' | * ''[[ilvB]]-[[ilvH]]-[[ilvC]]-[[leuA]]-[[leuB]]-[[leuC]]-[[leuD]]'' | ||
* ''[[pel]]'' | * ''[[pel]]'' | ||
| − | * ''[[yodF]]'' | + | * ''[[pycA]]'' |
| + | * ''[[yoyD]]-[[yodF]]'' | ||
* ''[[yttA]]'' | * ''[[yttA]]'' | ||
| − | * ''[[ | + | * ''[[yuiA]]'' |
| − | * ''[[ | + | * ''[[yvgT]]'' |
| − | * ''[[ywdK]]'' | + | * ''[[ywdI]]-[[ywdJ]]-[[ywdK]]'' |
| − | * ''[[ywlF]] | + | * ''[[ywlF]]-[[ywlG]]'' |
| − | + | * ''[[yycC]]-[[yycB]]'' | |
| − | * ''[[ | ||
| − | |||
= Important publications on the [[TnrA]] regulon = | = Important publications on the [[TnrA]] regulon = | ||
| − | <pubmed> 12823818,</pubmed> | + | <pubmed> 12823818,25755103</pubmed> |
= Related pages = | = Related pages = | ||
Latest revision as of 10:21, 30 July 2015
| Regulator | |
Contents
Genes in this regulon
Activation
- ansZ
- appD-appF-appA-appB-appC
- dtpT
- gabP
- glnQ-glnH-glnM-glnP
- nasA
- nasB-nasC-nasD-nasE-nasF
- nrgA-nrgB
- oppA-oppB-oppC-oppD-oppF
- pucJ-pucK-pucL-pucM
- pucR
- tnrA
- ureA-ureB-ureC
- ycsF-ycsG-ycsI-kipI-kipA-kipR-lipC
- yfiR
- ykzB-ykoL
- yrbD
- ysnD
- ywrD
- yxkC
Repression
- alsT
- degU
- glnR-glnA
- gltA-gltB
- hom
- ilvB-ilvH-ilvC-leuA-leuB-leuC-leuD
- pel
- pycA
- yoyD-yodF
- yttA
- yuiA
- yvgT
- ywdI-ywdJ-ywdK
- ywlF-ywlG
- yycC-yycB
Important publications on the TnrA regulon
Nicolas Mirouze, Elena Bidnenko, Philippe Noirot, Sandrine Auger
Genome-wide mapping of TnrA-binding sites provides new insights into the TnrA regulon in Bacillus subtilis.
Microbiologyopen: 2015, 4(3);423-35
[PubMed:25755103]
[WorldCat.org]
[DOI]
(I p)
Ken-ichi Yoshida, Hirotake Yamaguchi, Masaki Kinehara, Yo-hei Ohki, Yoshiko Nakaura, Yasutaro Fujita
Identification of additional TnrA-regulated genes of Bacillus subtilis associated with a TnrA box.
Mol Microbiol: 2003, 49(1);157-65
[PubMed:12823818]
[WorldCat.org]
[DOI]
(P p)
