Difference between revisions of "ThiF"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU11700&redirect=T BSU11700] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/tenAI-goxB-thiSGF-yjbV.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/tenAI-goxB-thiSGF-yjbV.html] | ||
| Line 94: | Line 95: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU11700&redirect=T BSU11700] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=1ZFN 1ZFN] (from ''E. coli'', 35% identity, 51% similarity) {{PubMed|15896804}} | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=1ZFN 1ZFN] (from ''E. coli'', 35% identity, 51% similarity) {{PubMed|15896804}} | ||
Revision as of 13:26, 2 April 2014
- Description: hydroxyethylthiazole phosphate biosynthesis
| Gene name | thiF |
| Synonyms | yjbU |
| Essential | no |
| Product | unknown |
| Function | biosynthesis of thiamine |
| Gene expression levels in SubtiExpress: thiF | |
| Metabolic function and regulation of this protein in SubtiPathways: thiF | |
| MW, pI | 36 kDa, 5.619 |
| Gene length, protein length | 1008 bp, 336 aa |
| Immediate neighbours | thiG, thiD |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU11700
Phenotypes of a mutant
Database entries
- BsubCyc: BSU11700
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): MoeB
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU11700
- UniProt: O31619
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Christopher T Jurgenson, Tadhg P Begley, Steven E Ealick
The structural and biochemical foundations of thiamin biosynthesis.
Annu Rev Biochem: 2009, 78;569-603
[PubMed:19348578]
[WorldCat.org]
[DOI]
(I p)
T P Begley, D M Downs, S E Ealick, F W McLafferty, A P Van Loon, S Taylor, N Campobasso, H J Chiu, C Kinsland, J J Reddick, J Xi
Thiamin biosynthesis in prokaryotes.
Arch Microbiol: 1999, 171(5);293-300
[PubMed:10382260]
[WorldCat.org]
[DOI]
(P p)
Original publications
