Difference between revisions of "TcyC"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk)
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* '''Description:''' cystine [[ABC transporter]], ATP-binding protein <br/><br/>
  
 
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|style="background:#ABCDEF;" align="center"|'''Function''' || cystine uptake
 
|style="background:#ABCDEF;" align="center"|'''Function''' || cystine uptake
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU03590 tcyC]
 
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/TcyC TcyC]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/TcyC TcyC]
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|colspan="2" | '''Genetic context''' <br/> [[Image:yckI_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yckI_context.gif]]
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=tcyC_409208_409951_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:tcyC_expression.png|500px]]
 
 
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* '''Operon:''' ''[[tcyA]]-[[tcyB]]-[[tcyC]]'' (putative) {{PubMed|15262924}}
 
* '''Operon:''' ''[[tcyA]]-[[tcyB]]-[[tcyC]]'' (putative) {{PubMed|15262924}}
  
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=tcyC_409208_409951_-1 tcyC] {{PubMed|22383849}}
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* '''[[Sigma factor]]:'''  
 
 
* '''Sigma factor:'''  
 
  
 
* '''Regulation:''' very weakly expressed under all conditions {{PubMed|15262924}}
 
* '''Regulation:''' very weakly expressed under all conditions {{PubMed|15262924}}

Revision as of 11:17, 7 August 2012

Gene name tcyC
Synonyms yckI
Essential no
Product cystine ABC transporter, ATP-binding protein
Function cystine uptake
Interactions involving this protein in SubtInteract: TcyC
MW, pI 27 kDa, 7.188
Gene length, protein length 741 bp, 247 aa
Immediate neighbours yczE, tcyB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YckI context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

ABC transporters, biosynthesis/ acquisition of amino acids, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU03590

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: ABC transporter domain (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 2Q0H (in complex with ADP-Mg2+, Geobacillus stearothermophilus, 55% identity)
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: very weakly expressed under all conditions PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Pierre Burguière, Sandrine Auger, Marie-Françoise Hullo, Antoine Danchin, Isabelle Martin-Verstraete
Three different systems participate in L-cystine uptake in Bacillus subtilis.
J Bacteriol: 2004, 186(15);4875-84
[PubMed:15262924] [WorldCat.org] [DOI] (P p)

Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453] [WorldCat.org] [DOI] (P p)

F Rodriguez, G Grandi
An operon encoding a novel ABC-type transport system in Bacillus subtilis.
Microbiology (Reading): 1995, 141 ( Pt 7);1781-4
[PubMed:7551042] [WorldCat.org] [DOI] (P p)