Difference between revisions of "SwrAA/2"

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Line 8: Line 8:
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || write here
+
|style="background:#ABCDEF;" align="center"| '''Essential''' || -
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || write here
+
|style="background:#ABCDEF;" align="center"| '''Product''' || swarming motility protein
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || write here
+
|style="background:#ABCDEF;" align="center"|'''Function''' || essential for swarming differentiation on solid surfaces
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU35239 swrAA/2]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU35239 swrAA/2]
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' ||
+
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || -, -
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' ||  
+
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 113 bp, -
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||  
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[swrAA/1]]'', ''[[ctpB]]''
 
|-
 
|-
 
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
 
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
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=== Basic information ===
 
=== Basic information ===
  
* '''Locus tag:'''
+
* '''Locus tag:''' BSU35239
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===

Revision as of 10:38, 22 November 2012

  • Description: control of DegU activity, enhances sigD transcription, part of the swrAA pseudogene

Gene name swrAA/2
Synonyms
Essential -
Product swarming motility protein
Function essential for swarming differentiation on solid surfaces
Gene expression levels in SubtiExpress: swrAA/2
MW, pI -, -
Gene length, protein length 113 bp, -
Immediate neighbours swrAA/1, ctpB
Gene sequence (+200bp) Protein sequence
Genetic context
File:SwrAA/2 context.gif



Categories containing this gene/protein

pseudogenes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU35239

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: no entry

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

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