Difference between revisions of "SurC"

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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE.txt    Gene sequence      (+200bp)  ]'''  
 
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE.txt    Gene sequence      (+200bp)  ]'''  
 
|-
 
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:genE_context.gif]]
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|colspan="2" | '''Genetic context''' <br/> [[Image:SurC_context.jpeg]]
 
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|-
 
|}
 
|}
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<br/><br/><br/><br/><br/>
 
<br/><br/><br/><br/><br/>
 +
= [[Categories]] containing this gene/protein =
 +
{{SubtiWiki category|[[sporulation/ other]]}},
 +
{{SubtiWiki category|[[ncRNA]]}}
 +
 +
= This gene is a member of the following [[regulons]] =
 +
{{SubtiWiki regulon|[[SigK regulon]]}}
 +
 
=The gene=
 
=The gene=
  
 
=== Basic information ===
 
=== Basic information ===
  
* '''Coordinates:'''
+
* '''Locus tag:'''
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=?&redirect=T ?]
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=?&redirect=T ?]
  
 
* '''DBTBS entry:''' no entry
 
* '''DBTBS entry:''' no entry
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=== Additional information===
 
=== Additional information===
 +
 +
  
  
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
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* '''Operon:''' ''surC'' [http://www.ncbi.nlm.nih.gov/sites/entrez/16385044 PubMed]
  
* '''Sigma factor:'''  
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* '''Sigma factor:''' [[SigK]] [http://www.ncbi.nlm.nih.gov/sites/entrez/16385044 PubMed]
  
* '''Regulation:'''  
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* '''Regulation:''' expressed during sporulation in the mother cell ([[SigK]], [[GerE]])[http://www.ncbi.nlm.nih.gov/sites/entrez/16385044 PubMed]
  
* '''Regulatory mechanism:'''  
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* '''Regulatory mechanism:''' [[GerE]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/16385044 PubMed]
  
 
* '''Additional information:'''  
 
* '''Additional information:'''  
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=Labs working on this gene/RNA=
 
=Labs working on this gene/RNA=
  
Kouji Nakamura, Tsukuba, University, Japan
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=Your additional remarks=
 
=Your additional remarks=
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=References=
 
=References=
  
# Silvaggi JM, Perkins JB, Losick R (2006) Genes for small, noncoding RNAs under sporulation control in ''Bacillus subtilis''. ''J. Bacteriol.'' '''188:''' 532-541. [http://www.ncbi.nlm.nih.gov/sites/entrez/16385044 PubMed]
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<pubmed>16385044,,16385044, </pubmed>
 +
 
 +
[[Category:small RNA]]

Latest revision as of 15:23, 2 April 2014

  • Description: small RNA

Gene name surC
Synonyms
Essential no
Product small RNA
Function unknown
Gene length bp
Immediate neighbours dnaJ, dnaK
Gene sequence (+200bp)
Genetic context
SurC context.jpeg








Categories containing this gene/protein

sporulation/ other, ncRNA

This gene is a member of the following regulons

SigK regulon

The gene

Basic information

  • Locus tag:

Phenotypes of a mutant

Database entries

  • BsubCyc: ?
  • BsubCyc: ?
  • DBTBS entry: no entry
  • SubtiList entry: no entry
  • Structure:

Additional information

Expression and regulation

  • Regulation: expressed during sporulation in the mother cell (SigK, GerE)PubMed
  • Regulatory mechanism: GerE: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:


Labs working on this gene/RNA

Your additional remarks

References

Jessica M Silvaggi, John B Perkins, Richard Losick
Genes for small, noncoding RNAs under sporulation control in Bacillus subtilis.
J Bacteriol: 2006, 188(2);532-41
[PubMed:16385044] [WorldCat.org] [DOI] (P p)