Difference between revisions of "Stringent response"

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(Negative regulation)
 
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* ''[[gcaD]]-[[prs]]''
 
* ''[[gcaD]]-[[prs]]''
 
* ''[[infA]]''
 
* ''[[infA]]''
* ''[[infB]]''
+
* ''[[infC]]-[[rpmI]]-[[rplT]]''
* ''[[infC]]''
 
 
* ''[[map]]''
 
* ''[[map]]''
 
* ''[[mbl]]''
 
* ''[[mbl]]''
 
* ''[[murE]]''
 
* ''[[murE]]''
* ''[[ndh]]''
 
* ''[[nusA]]''
 
 
* ''[[nusB]]''
 
* ''[[nusB]]''
* ''[[pdhA]]''
+
* ''[[pdhA]]-[[pdhB]]-[[pdhC]]-[[pdhD]]''
* ''[[pdhB]]''
 
* ''[[pdhC]]''
 
* ''[[pdhD]]''
 
 
* ''[[pnpA]]''
 
* ''[[pnpA]]''
 
* ''[[ptsG]]-[[ptsH]]-[[ptsI]]''
 
* ''[[ptsG]]-[[ptsH]]-[[ptsI]]''
 
* ''[[pyrH]]''
 
* ''[[pyrH]]''
* ''[[qoxA]]''
+
* ''[[qoxA]]-[[qoxB]]-[[qoxC]]-[[qoxD]]''
* ''[[qoxB]]''
+
* ''[[recJ]]''
* ''[[qoxC]]''
 
* ''[[qoxD]]''
 
* ''[[rbfA]]''
 
 
* ''[[rnc]]''
 
* ''[[rnc]]''
 
* ''[[rplA]]''
 
* ''[[rplA]]''
* ''[[rplB]]''
 
* ''[[rplC]]''
 
* ''[[rplD]]''
 
* ''[[rplE]]''
 
* ''[[rplF]]''
 
 
* ''[[rplJ]]''
 
* ''[[rplJ]]''
 
* ''[[rplK]]''
 
* ''[[rplK]]''
 
* ''[[rplL]]''
 
* ''[[rplL]]''
 
* ''[[rplM]]''
 
* ''[[rplM]]''
* ''[[rplN]]''
 
* ''[[rplO]]''
 
* ''[[rplP]]''
 
 
* ''[[rplQ]]''
 
* ''[[rplQ]]''
* ''[[rplR]]''
 
 
* ''[[rplS]]''
 
* ''[[rplS]]''
* ''[[rplT]]''
 
 
* ''[[rplU]]''
 
* ''[[rplU]]''
* ''[[rplV]]''
 
* ''[[rplW]]''
 
* ''[[rplX]]''
 
 
* ''[[rpmB]]''
 
* ''[[rpmB]]''
* ''[[rpmC]]''
 
* ''[[rpmD]]''
 
 
* ''[[rpmE]]''
 
* ''[[rpmE]]''
 
* ''[[rpmF]]''
 
* ''[[rpmF]]''
* ''[[rpmI]]''
 
 
* ''[[rpmJ]]''
 
* ''[[rpmJ]]''
 
* ''[[rpoA]]''
 
* ''[[rpoA]]''
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* ''[[rpoC]]''
 
* ''[[rpoC]]''
 
* ''[[rpsB]]''
 
* ''[[rpsB]]''
* ''[[rpsC]]''
 
 
* ''[[rpsD]]''
 
* ''[[rpsD]]''
* ''[[rpsE]]''
+
* ''[[rpsF]]-[[ssbA]]-[[rpsR]]''
* ''[[rpsF]]''
 
 
* ''[[rpsG]]''
 
* ''[[rpsG]]''
* ''[[rpsH]]''
 
 
* ''[[rpsI]]''
 
* ''[[rpsI]]''
* ''[[rpsJ]]''
+
* ''[[rpsJ]]-[[rplC]]-[[rplD]]-[[rplW]]-[[rplB]]-[[rpsS]]-[[rplV]]-[[rpsC]]-[[rplP]]-[[rpmC]]-[[rpsQ]]-[[rplN]]-[[rplX]]-[[rplE]]-[[rpsN]]-[[rpsH]]-[[rplF]]-[[rplR]]-[[rpsE]]-[[rpmD]]-[[rplO]]''
 
* ''[[rpsK]]''
 
* ''[[rpsK]]''
 
* ''[[rpsL]]''
 
* ''[[rpsL]]''
 
* ''[[rpsM]]''
 
* ''[[rpsM]]''
* ''[[rpsN]]''
 
 
* ''[[rpsO]]''
 
* ''[[rpsO]]''
 
* ''[[rpsP]]''
 
* ''[[rpsP]]''
* ''[[rpsQ]]''
+
* ''[[scpA]]-[[scpB]]''
* ''[[rpsR]]''
 
* ''[[rpsS]]''
 
* ''[[scpA]]''
 
* ''[[scpB]]''
 
 
* ''[[secY]]''
 
* ''[[secY]]''
* ''[[ssbA]]''
 
 
* ''[[tig]]''
 
* ''[[tig]]''
 
* ''[[truA]]''
 
* ''[[truA]]''
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* ''[[ybxB]]''
 
* ''[[ybxB]]''
 
* ''[[ybxF]]''
 
* ''[[ybxF]]''
* ''[[yjlC]]''
+
* ''[[yjlC]]-[[ndh]]''
 
* ''[[ylaG]]''
 
* ''[[ylaG]]''
 
* ''[[ylbN]]''
 
* ''[[ylbN]]''
* ''[[ylxP]]''
+
* ''[[ylxS]]-[[nusA]]-[[ylxR]]-[[ylxQ]]-[[infB]]-[[ylxP]]-[[rbfA]]''
* ''[[ylxQ]]''
+
 
* ''[[ylxR]]''
 
* ''[[ylxS]]''
 
* ''[[yrvE]]''
 
 
* ''[[ysxB]]''
 
* ''[[ysxB]]''
 
* ''[[yugI]]''
 
* ''[[yugI]]''
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* ''[[alsS]]-[[alsD]]''
 
* ''[[alsS]]-[[alsD]]''
 
* ''[[pycA]]''
 
* ''[[pycA]]''
 +
 +
=Key original publications=
 +
<pubmed>20081037 18433449 11948165 9383190  </pubmed>
 +
 +
=Important reviews=
 +
<pubmed>18452582 17982469  24462007 </pubmed>
 +
 +
=Back to [[regulons]]=

Latest revision as of 08:52, 7 July 2015

Regulator

stringent response

Genes in this regulon

Negative regulation

Positive regulation

Key original publications


Important reviews

Tobias Geiger, Christiane Wolz
Intersection of the stringent response and the CodY regulon in low GC Gram-positive bacteria.
Int J Med Microbiol: 2014, 304(2);150-5
[PubMed:24462007] [WorldCat.org] [DOI] (I p)

Charles L Turnbough
Regulation of bacterial gene expression by the NTP substrates of transcription initiation.
Mol Microbiol: 2008, 69(1);10-4
[PubMed:18452582] [WorldCat.org] [DOI] (I p)

Abraham L Sonenshein
Control of key metabolic intersections in Bacillus subtilis.
Nat Rev Microbiol: 2007, 5(12);917-27
[PubMed:17982469] [WorldCat.org] [DOI] (I p)


Back to regulons