Difference between revisions of "SpoIVCA"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[spoIVCB]]'', ''[[arsC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[spoIVCB]]'', ''[[arsC]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU25770 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU25770 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU25770 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU25770 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU25770 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU25770 DNA_with_flanks]
 
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Revision as of 10:47, 14 May 2013

  • Description: site-specific DNA recombinase required for creating the sigK gene (excision of the skin element)

Gene name spoIVCA
Synonyms cisA
Essential no
Product site-specific DNA recombinase
Function excision of the skin element, creation of the sigK gene
Gene expression levels in SubtiExpress: spoIVCA
MW, pI 57 kDa, 9.498
Gene length, protein length 1500 bp, 500 aa
Immediate neighbours spoIVCB, arsC
Sequences Protein DNA DNA_with_flanks
Genetic context
SpoIVCA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SpoIVCA expression.png















Categories containing this gene/protein

DNA repair/ recombination, sigma factors and their control, sporulation proteins, Skin element

This gene is a member of the following regulons

SigE regulon, SpoIIID regulon

The gene

Basic information

  • Locus tag: BSU25770

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

R Halberg, L Kroos
Sporulation regulatory protein SpoIIID from Bacillus subtilis activates and represses transcription by both mother-cell-specific forms of RNA polymerase.
J Mol Biol: 1994, 243(3);425-36
[PubMed:7966271] [WorldCat.org] [DOI] (P p)

B Kunkel, R Losick, P Stragier
The Bacillus subtilis gene for the development transcription factor sigma K is generated by excision of a dispensable DNA element containing a sporulation recombinase gene.
Genes Dev: 1990, 4(4);525-35
[PubMed:2163341] [WorldCat.org] [DOI] (P p)

T Sato, Y Samori, Y Kobayashi
The cisA cistron of Bacillus subtilis sporulation gene spoIVC encodes a protein homologous to a site-specific recombinase.
J Bacteriol: 1990, 172(2);1092-8
[PubMed:2105293] [WorldCat.org] [DOI] (P p)

B Kunkel, K Sandman, S Panzer, P Youngman, R Losick
The promoter for a sporulation gene in the spoIVC locus of Bacillus subtilis and its use in studies of temporal and spatial control of gene expression.
J Bacteriol: 1988, 170(8);3513-22
[PubMed:2841290] [WorldCat.org] [DOI] (P p)