Difference between revisions of "SpoIIP"
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
{{SubtiWiki regulon|[[SigE regulon]]}}, | {{SubtiWiki regulon|[[SigE regulon]]}}, | ||
| − | {{SubtiWiki regulon|[[SigF regulon]]}} | + | {{SubtiWiki regulon|[[SigF regulon]]}}, |
| + | [[Efp-dependent proteins]] | ||
=The gene= | =The gene= | ||
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* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
| − | ** [[SpoIID]]-[[SpoIIP]] {{PubMed|20159959}} | + | ** [[SpoIID]]-[[SpoIIP]] {{PubMed|20159959}} |
| + | ** [[SpoIIP]]-[[SpoIIM]] {{PubMed|17376078}} | ||
* '''[[Localization]]:''' cell membrane {{PubMed|20159959}} | * '''[[Localization]]:''' cell membrane {{PubMed|20159959}} | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIIP_2633237_2634442_-1 spoIIP] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIIP_2633237_2634442_-1 spoIIP] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
** ''[[spoIIP]]'': [[SigE]] {{PubMed|7836306}} | ** ''[[spoIIP]]'': [[SigE]] {{PubMed|7836306}} | ||
** ''[[gpr]]'':[[SigF]] {{PubMed|16497325}} | ** ''[[gpr]]'':[[SigF]] {{PubMed|16497325}} | ||
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* '''Additional information:''' | * '''Additional information:''' | ||
| + | ** [[translation]] is likely to require [[Efp]] due to the presence of several consecutive proline residues {{PubMed|23239624,23239623}} | ||
=Biological materials = | =Biological materials = | ||
Revision as of 19:22, 29 April 2013
- Description: cell wall hydrolase with both amidase and endopeptidase activities, required for dissolution of the septal cell wall
| Gene name | spoIIP |
| Synonyms | |
| Essential | no |
| Product | cell wall hydrolase |
| Function | dissolution of the septal cell wall |
| Gene expression levels in SubtiExpress: spoIIP | |
| Interactions involving this protein in SubtInteract: SpoIIP | |
| MW, pI | 44 kDa, 6.852 |
| Gene length, protein length | 1203 bp, 401 aa |
| Immediate neighbours | yqxA, gpr |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
cell wall/ other, sporulation proteins, membrane proteins
This gene is a member of the following regulons
SigE regulon, SigF regulon, Efp-dependent proteins
The gene
Basic information
- Locus tag: BSU25530
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: removes the stem peptides from the cell wall and cleaves the cross-links between them PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Localization: cell membrane PubMed
Database entries
- Structure:
- UniProt: P37968
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
- translation is likely to require Efp due to the presence of several consecutive proline residues PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
