Difference between revisions of "SpoIIB"

From SubtiWiki
Jump to: navigation, search
Line 14: Line 14:
 
|style="background:#ABCDEF;" align="center"|'''Function''' || spore morphogenesis
 
|style="background:#ABCDEF;" align="center"|'''Function''' || spore morphogenesis
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU28060 spoIIB]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU28060 spoIIB]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 35 kDa, 4.797   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 35 kDa, 4.797   
Line 22: Line 22:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[maf]]'', ''[[comC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[maf]]'', ''[[comC]]''
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14766&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU28060 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU28060 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU28060 Advanced_DNA]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:spoIIB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:spoIIB_context.gif]]

Revision as of 13:29, 13 May 2013

  • Description: spatial and temporal regulation of the dissolution of septal peptidoglycan during engulfment

Gene name spoIIB
Synonyms
Essential no
Product facilitator of septal dissolution
Function spore morphogenesis
Gene expression levels in SubtiExpress: spoIIB
MW, pI 35 kDa, 4.797
Gene length, protein length 996 bp, 332 aa
Immediate neighbours maf, comC
Sequences Protein DNA Advanced_DNA
Genetic context
SpoIIB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SpoIIB expression.png
























Categories containing this gene/protein

sporulation/ other

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU28060

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • repressed by casamino acids PubMed
    • expression is reduced in a SigV mutant PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed

Arnaud Chastanet, Richard Losick
Engulfment during sporulation in Bacillus subtilis is governed by a multi-protein complex containing tandemly acting autolysins.
Mol Microbiol: 2007, 64(1);139-52
[PubMed:17376078] [WorldCat.org] [DOI] (P p)

Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability.
J Bacteriol: 2002, 184(15);4288-95
[PubMed:12107147] [WorldCat.org] [DOI] (P p)

O Resnekov, A Driks, R Losick
Identification and characterization of sporulation gene spoVS from Bacillus subtilis.
J Bacteriol: 1995, 177(19);5628-35
[PubMed:7559352] [WorldCat.org] [DOI] (P p)

P S Margolis, A Driks, R Losick
Sporulation gene spoIIB from Bacillus subtilis.
J Bacteriol: 1993, 175(2);528-40
[PubMed:8419299] [WorldCat.org] [DOI] (P p)