Difference between revisions of "SpeE"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[speB]]'', ''[[pbpG]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[speB]]'', ''[[pbpG]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU37500 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU37500 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU37500 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU37500 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU37500 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU37500 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:speE_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:speE_context.gif]]

Revision as of 11:33, 14 May 2013

  • Description: spermidine synthase

Gene name speE
Synonyms ywhF
Essential no
Product spermidine synthase
Function spermidine, polyamine biosynthesis
Gene expression levels in SubtiExpress: speE
Metabolic function and regulation of this protein in SubtiPathways:
Cys, Met & Sulfate assimilation
MW, pI 31 kDa, 5.068
Gene length, protein length 828 bp, 276 aa
Immediate neighbours speB, pbpG
Sequences Protein DNA DNA_with_flanks
Genetic context
SpeE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SpeE expression.png




























Categories containing this gene/protein

miscellaneous metabolic pathways

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU37500

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: S-adenosylmethioninamine + putrescine = 5'-S-methyl-5'-thioadenosine + spermidine (according to Swiss-Prot)
  • Protein family: spermidine/spermine synthase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

A Sekowska, P Bertin, A Danchin
Characterization of polyamine synthesis pathway in Bacillus subtilis 168.
Mol Microbiol: 1998, 29(3);851-8
[PubMed:9723923] [WorldCat.org] [DOI] (P p)