Difference between revisions of "Slr"

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* '''Description:''' antagonist of SlrR, involved in control of flagellar genes and eps and yqxM operons <br/><br/>
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* '''Description:''' transcriptional activator of competence development and sporulation genes, represses SigD-dependent flagellar genes, activates eps and yqxM operons <br/><br/>
  
 
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
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|style="background:#ABCDEF;" align="center"| '''Product''' || antagonist of SlrR
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|style="background:#ABCDEF;" align="center"| '''Product''' || transcription regulator
 
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|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of initiation of biofilm formation
 
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of initiation of biofilm formation

Revision as of 11:52, 7 April 2009

  • Description: transcriptional activator of competence development and sporulation genes, represses SigD-dependent flagellar genes, activates eps and yqxM operons

Gene name slr
Synonyms yveJ, slrR
Essential no
Product transcription regulator
Function regulation of initiation of biofilm formation
MW, pI 17 kDa, 9.63
Gene length, protein length 456 bp, 152 aa
Immediate neighbours epsA, pnbA
Gene sequence (+200bp) Protein sequence
Genetic context
Slr context.gif
This image was kindly provided by SubtiList





The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): SinR

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed