Difference between revisions of "SigM"

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|style="background:#ABCDEF;" align="center"| '''Product''' || RNA polymerase ECF-type [[sigma factor]] SigM
 
|style="background:#ABCDEF;" align="center"| '''Product''' || RNA polymerase ECF-type [[sigma factor]] SigM
 
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|style="background:#ABCDEF;" align="center"|'''Function''' || resistance against cell envelope stress, oxidative stress and salt stress
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|style="background:#ABCDEF;" align="center"|'''Function''' || resistance against cell envelope stress, <br/>oxidative stress and salt stress
 
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|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 19 kDa, 6.77   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 19 kDa, 6.77   
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__TOC__
 
__TOC__
  
<br/><br/>
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<br/><br/><br/>
  
 
=The gene=
 
=The gene=

Revision as of 19:23, 21 May 2009

Gene name sigM
Synonyms yhdM
Essential no
Product RNA polymerase ECF-type sigma factor SigM
Function resistance against cell envelope stress,
oxidative stress and salt stress
MW, pI 19 kDa, 6.77
Gene length, protein length 489 bp, 163 aa
Immediate neighbours yhdL, yhdN
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
SigM context.gif
This image was kindly provided by SubtiList




The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: sigma-70 factor family, ECF subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Genes/ operons controlled by SigM

divIC, sigM-yhdLyhdK, yqjL, ypbG, ydaH, ypuA, radC, yebC, ywtF, rodA, ypuD, ytpA, ytpB, yngC, ycgR, ycgQ

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization:

Database entries

  • Structure:
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

John Helmann, Cornell University, USA Homepage

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed