Difference between revisions of "SigK regulon"

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(Genes in this regulon)
(Genes in this regulon)
 
(14 intermediate revisions by the same user not shown)
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= Genes in this [[regulon]] =
 
= Genes in this [[regulon]] =
* ''[[asd]]''
+
* ''[[cgeA]]-[[cgeB]]''
* ''[[cgeA]]''
+
* ''[[cgeC]]-[[cgeD]]-[[cgeE]]''
* ''[[cgeB]]''
 
* ''[[cgeC]]''
 
* ''[[cgeD]]''
 
* ''[[cgeE]]''
 
 
* ''[[cotA]]''
 
* ''[[cotA]]''
* ''[[cotB]]''
 
 
* ''[[cotC]]''
 
* ''[[cotC]]''
 
* ''[[cotD]]''
 
* ''[[cotD]]''
Line 17: Line 12:
 
* ''[[cotF]]''
 
* ''[[cotF]]''
 
* ''[[cotG]]''
 
* ''[[cotG]]''
* ''[[cotH]]''
+
* ''[[cotH]]-[[cotB]]-[[ywrJ]]''
 
* ''[[cotI]]''
 
* ''[[cotI]]''
 
* ''[[cotM]]''
 
* ''[[cotM]]''
* ''[[cotP]]''
 
 
* ''[[cotQ]]''
 
* ''[[cotQ]]''
 
* ''[[cotR]]''
 
* ''[[cotR]]''
* ''[[cotS]]''
+
* ''[[cotSA]]-[[cotS]]-[[ytxO]]''
* ''[[cotSA]]''
 
 
* ''[[cotT]]''
 
* ''[[cotT]]''
* ''[[cotV]]''
+
* ''[[cotU]]''
* ''[[cotW]]''
+
* ''[[cotV]]-[[cotW]]-[[cotX]]''
* ''[[cotX]]''
+
* ''[[cotY]]-[[cotZ]]''
* ''[[cotY]]''
+
* ''[[csfB]]''
* ''[[cotZ]]''
 
 
* ''[[cwlC]]''
 
* ''[[cwlC]]''
 
* ''[[cwlH]]''
 
* ''[[cwlH]]''
 
* ''[[cwlJ]]''
 
* ''[[cwlJ]]''
* ''[[dapA]]''
 
* ''[[dapG]]''
 
 
* ''[[ftsY]]''
 
* ''[[ftsY]]''
 
* ''[[gerE]]''
 
* ''[[gerE]]''
* ''[[gerPA]]''
+
* ''[[gerPA]]-[[gerPB]]-[[gerPC]]-[[gerPD]]-[[gerPE]]-[[gerPF]]''
* ''[[gerPB]]''
 
* ''[[gerPC]]''
 
* ''[[gerPD]]''
 
* ''[[gerPE]]''
 
* ''[[gerPF]]''
 
 
* ''[[gerT]]''
 
* ''[[gerT]]''
 
* ''[[ldt]]''
 
* ''[[ldt]]''
Line 49: Line 34:
 
* ''[[lytH]]''
 
* ''[[lytH]]''
 
* ''[[oxdD]]''
 
* ''[[oxdD]]''
* ''[[spoIIIC]]''
+
* ''[[pghL]]''
 
* ''[[spoIISA]]''
 
* ''[[spoIISA]]''
* ''[[spoIVCB]]''
+
* ''[[spoIVCB]]-[[spoIIIC]]'' (composite ''[[sigK]]'' gene)
* ''[[spoVFA]]''
+
* ''[[spoVFA]]-[[spoVFB]][[asd]]-[[dapG]]-[[dapA]]''
* ''[[spoVFB]]''
 
 
* ''[[spoVIF]]''
 
* ''[[spoVIF]]''
 
* ''[[spoVK]]''
 
* ''[[spoVK]]''
* ''[[spsA]]''
+
* ''[[spsA]]-[[spsB]]-[[spsC]]-[[spsD]]-[[spsE]]-[[spsF]]-[[spsG]]-[[spsI]]-[[spsJ]]-[[spsK]]-[[spsL]]''
* ''[[spsB]]''
 
* ''[[spsC]]''
 
* ''[[spsD]]''
 
* ''[[spsE]]''
 
* ''[[spsF]]''
 
* ''[[spsG]]''
 
* ''[[spsI]]''
 
* ''[[spsJ]]''
 
* ''[[spsK]]''
 
* ''[[spsL]]''
 
 
* ''[[sscA]]''
 
* ''[[sscA]]''
* ''[[sspG]]''
+
* ''[[sspG]]-[[yurS]]''
 
* ''[[surC]]''
 
* ''[[surC]]''
 
* ''[[tgl]]''
 
* ''[[tgl]]''
 
* ''[[xpaC]]-[[yaaN]]-[[yaaO]]''
 
* ''[[xpaC]]-[[yaaN]]-[[yaaO]]''
 
* ''[[yabG]]''
 
* ''[[yabG]]''
* ''[[ydgA]]''
+
* ''[[ydgB]]-[[ydgA]]-[[cotP]]''
* ''[[ydgB]]''
 
 
* ''[[yeeK]]''
 
* ''[[yeeK]]''
* ''[[yfnD]]''
+
* ''[[yfnH]]-[[yfnG]]-[[yfnF]]-[[yfnE]]-[[yfnD]]''
* ''[[yfnE]]''
 
* ''[[yfnF]]''
 
* ''[[yfnG]]''
 
* ''[[yfnH]]''
 
 
* ''[[yhcO]]''
 
* ''[[yhcO]]''
 
* ''[[yhjR]]''
 
* ''[[yhjR]]''
 
* ''[[yisY]]''
 
* ''[[yisY]]''
* ''[[yisZ]]''
+
* ''[[yitB]]-[[yitA]]-[[yisZ]]''
* ''[[yitA]]''
+
* ''[[yitC]]-[[yitD]]''
* ''[[yitB]]''
 
* ''[[yitC]]''
 
* ''[[yitD]]''
 
 
* ''[[yjzB]]''
 
* ''[[yjzB]]''
* ''[[ykvP]]''
+
* ''[[ykvP]]-[[ykvQ]]''
* ''[[ykvQ]]''
+
* ''[[ylbD]]-[[ylbE]]''
* ''[[ylbD]]''
 
* ''[[ylbE]]''
 
 
* ''[[ymaG]]''
 
* ''[[ymaG]]''
* ''[[yndL]]''
+
 
 
* ''[[yobW]]''
 
* ''[[yobW]]''
* ''[[yodH]]''
+
* ''[[yodH]]-[[yodI]]''
* ''[[yodI]]''
+
* ''[[yodU]]''
 
* ''[[yppG]]''
 
* ''[[yppG]]''
 
* ''[[ypqA]]''
 
* ''[[ypqA]]''
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* ''[[ysnD]]''
 
* ''[[ysnD]]''
 
* ''[[ytcA]]-[[ytcB]]-[[ytcC]]''
 
* ''[[ytcA]]-[[ytcB]]-[[ytcC]]''
* ''[[ytlA]]''
+
* ''[[ytdA]]''
* ''[[ytlC]]''
+
* ''[[ytlA]]-[[ytlC]]-[[ytlD]]''
* ''[[ytlD]]''
 
* ''[[ytxO]]''
 
* ''[[yurS]]''
 
* ''[[ywrJ]]''
 
 
* ''[[yxeE]]''
 
* ''[[yxeE]]''
  

Latest revision as of 17:58, 2 December 2015

Regulator

SigK

Genes in this regulon

Important publications on the SigK regulon

Jessica M Silvaggi, John B Perkins, Richard Losick
Genes for small, noncoding RNAs under sporulation control in Bacillus subtilis.
J Bacteriol: 2006, 188(2);532-41
[PubMed:16385044] [WorldCat.org] [DOI] (P p)

Patrick Eichenberger, Masaya Fujita, Shane T Jensen, Erin M Conlon, David Z Rudner, Stephanie T Wang, Caitlin Ferguson, Koki Haga, Tsutomu Sato, Jun S Liu, Richard Losick
The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.
PLoS Biol: 2004, 2(10);e328
[PubMed:15383836] [WorldCat.org] [DOI] (I p)


Back to regulons