Difference between revisions of "SigF"

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* '''Description:''' RNA polymerase forespore-specific (early) sigma factor SigF <br/><br/>
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* '''Description:''' RNA polymerase forespore-specific (early) [[sigma factor]] SigF <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || RNA polymerase forespore-specific (early) sigma factor SigF
+
|style="background:#ABCDEF;" align="center"| '''Product''' || RNA polymerase forespore-specific (early) [[sigma factor]] SigF
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || transcription of sporulation genes (late mother cell)
 
|style="background:#ABCDEF;" align="center"|'''Function''' || transcription of sporulation genes (late mother cell)
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''[[spoIIAA]]-[[spoIIAB]]-[[sigF]]''
 
''[[spoIIAA]]-[[spoIIAB]]-[[sigF]]''
  
* '''Sigma factor:''' ''[[dacF]]'': [[SigF]], [[SigG]]
+
* '''[[Sigma factor]]:''' ''[[dacF]]'': [[SigF]], [[SigG]]
 
''[[spoIIA]]'': [[SigH]]
 
''[[spoIIA]]'': [[SigH]]
  

Revision as of 17:07, 7 April 2009

  • Description: RNA polymerase forespore-specific (early) sigma factor SigF

Gene name sigF
Synonyms spoIIAC
Essential no
Product RNA polymerase forespore-specific (early) sigma factor SigF
Function transcription of sporulation genes (late mother cell)
MW, pI 29 kDa, 5.078
Gene length, protein length 765 bp, 255 aa
Immediate neighbours spoVAA, spoIIAB
Gene sequence (+200bp) Protein sequence
Genetic context
SigF context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Genes controlled by SigF

dacF-spoIIAA-spoIIAB-sigF, sigG, pbpF, yphA-seaA

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

spoIIAA-spoIIAB-sigF

spoIIA: SigH

  • Regulation: repressed by casamino acids PubMed , dacF: expressed during sporulation, spoIIAA: expressed early during sporulation
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Mäder et al. (2002) Transcriptome and Proteome Analysis of Bacillus subtilis Gene Expression Modulated by Amino Acid Availability. J. Bacteriol 184: 1844288-4295 PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed