Difference between revisions of "SenS"

From SubtiWiki
Jump to: navigation, search
Line 13: Line 13:
 
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of extracellular enzyme genes
 
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of extracellular enzyme genes
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU08810 senS]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU08810 senS]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 8 kDa, 10.551   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 8 kDa, 10.551   
Line 21: Line 21:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ygaK]]'', ''[[katA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ygaK]]'', ''[[katA]]''
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12709&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU08810 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU08810 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU08810 Advanced_DNA]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:senS_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:senS_context.gif]]

Revision as of 12:24, 13 May 2013

  • Description: transcriptional regulator of extracellular enzyme genes

Gene name senS
Synonyms
Essential no
Product transcriptional regulator
Function regulation of extracellular enzyme genes
Gene expression levels in SubtiExpress: senS
MW, pI 8 kDa, 10.551
Gene length, protein length 216 bp, 72 aa
Immediate neighbours ygaK, katA
Sequences Protein DNA Advanced_DNA
Genetic context
SenS context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SenS expression.png
























Categories containing this gene/protein

utilization of specific carbon sources, transcription factors and their control

This gene is a member of the following regulons

The SenS regulon:

The gene

Basic information

  • Locus tag: BSU08810

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Eiji Kawachi, Sadanobu Abe, Teruo Tanaka
Inhibition of Bacillus subtilis scoC expression by multicopy senS.
J Bacteriol: 2005, 187(24);8526-30
[PubMed:16321961] [WorldCat.org] [DOI] (P p)

P M McCready, R H Doi
Bacillus subtilis SenS exerts its activity through a site in the 5' flanking region of the aprE promoter.
J Gen Microbiol: 1992, 138(10);2069-74
[PubMed:1479343] [WorldCat.org] [DOI] (P p)

L F Wang, R H Doi
Complex character of senS, a novel gene regulating expression of extracellular-protein genes of Bacillus subtilis.
J Bacteriol: 1990, 172(4);1939-47
[PubMed:2108127] [WorldCat.org] [DOI] (P p)