Difference between revisions of "SbcC"

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* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O06714 O06714]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O06714 O06714]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU10650]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU10650]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''

Revision as of 07:01, 25 June 2009

  • Description: DNA exonuclease

Gene name sbcC
Synonyms yirY
Essential no
Product DNA exonuclease
Function DNA inter-strand cross-link repair
MW, pI 128 kDa, 5.294
Gene length, protein length 3390 bp, 1130 aa
Immediate neighbours sbcD, yisB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YirY context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU10650

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: SbcC subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: Nucleoid (Mid-cell) PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Peter Graumann, Freiburg University, Germany homepage

Your additional remarks

References

Judita Mascarenhas, Humberto Sanchez, Serkalem Tadesse, Dawit Kidane, Mahalakshmi Krisnamurthy, Juan C Alonso, Peter L Graumann
Bacillus subtilis SbcC protein plays an important role in DNA inter-strand cross-link repair.
BMC Mol Biol: 2006, 7;20
[PubMed:16780573] [WorldCat.org] [DOI] (I e)

Jean-Christophe Meile, Ling Juan Wu, S Dusko Ehrlich, Jeff Errington, Philippe Noirot
Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory.
Proteomics: 2006, 6(7);2135-46
[PubMed:16479537] [WorldCat.org] [DOI] (P p)