Difference between revisions of "RsiV"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sigV]]'', ''[[oatA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sigV]]'', ''[[oatA]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU27130 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU27130 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU27130 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU27130 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU27130 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU27130 DNA_with_flanks]
 
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|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yrhM_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yrhM_context.gif]]

Revision as of 10:50, 14 May 2013

Gene name rsiV
Synonyms yrhM
Essential no
Product anti-sigma factor to SigV
Function control of SigV activity
Gene expression levels in SubtiExpress: rsiV
Interactions involving this protein in SubtInteract: RsiV
MW, pI 32 kDa, 5.833
Gene length, protein length 855 bp, 285 aa
Immediate neighbours sigV, oatA
Sequences Protein DNA DNA_with_flanks
Genetic context
YrhM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RsiV expression.png

























Categories containing this gene/protein

sigma factors and their control cell envelope stress proteins (controlled by SigM, V, W, X, Y)

This gene is a member of the following regulons

SigV regulon


The gene

Basic information

  • Locus tag: BSU27130

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed

Stephan Zellmeier, Claudia Hofmann, Sylvia Thomas, Thomas Wiegert, Wolfgang Schumann
Identification of sigma(V)-dependent genes of Bacillus subtilis.
FEMS Microbiol Lett: 2005, 253(2);221-9
[PubMed:16274938] [WorldCat.org] [DOI] (P p)

Mika Yoshimura, Kei Asai, Yoshito Sadaie, Hirofumi Yoshikawa
Interaction of Bacillus subtilis extracytoplasmic function (ECF) sigma factors with the N-terminal regions of their potential anti-sigma factors.
Microbiology (Reading): 2004, 150(Pt 3);591-599
[PubMed:14993308] [WorldCat.org] [DOI] (P p)