Difference between revisions of "RocC"

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=The gene=
 
=The gene=

Revision as of 15:49, 22 June 2009

  • Description: amino acid permease

Gene name rocC
Synonyms ipa-78d
Essential no
Product amino acid permease
Function arginine, ornithine and citrulline uptake
Metabolic function and regulation of this protein in SubtiPathways:
Ammonium/ glutamate
MW, pI 51 kDa, 8.41
Gene length, protein length 1410 bp, 470 aa
Immediate neighbours ywfA, rocB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RocC context.gif
This image was kindly provided by SubtiList







The gene

Basic information

  • Locus tag: BSU37760

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: amino acid-polyamine-organocation (APC) superfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: induction by arginine (RocR) PubMed, repressed by CodY PubMed
    • repressed during growth in the presence of branched chain amino acids (CodY) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References