Difference between revisions of "RhiN"

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Line 80: Line 80:
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O31521 O31521]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O31521 O31521]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU07000]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU07000]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''

Revision as of 06:22, 25 June 2009

  • Description: galacturonyl hydrolase, catalyses intracellular degradation of disaccharides generated by YesX

Gene name yesR
Synonyms
Essential no
Product galacturonyl hydrolase, catalyses intracellular degradation of disaccharides generated by YesX
Function intracellular degradation of disaccharides generated by YesX
MW, pI 38 kDa, 4.757
Gene length, protein length 1032 bp, 344 aa
Immediate neighbours yesQ, yesS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YesR context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU07000

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: glycosyl hydrolase 105 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Takafumi Itoh, Akihito Ochiai, Bunzo Mikami, Wataru Hashimoto, Kousaku Murata
A novel glycoside hydrolase family 105: the structure of family 105 unsaturated rhamnogalacturonyl hydrolase complexed with a disaccharide in comparison with family 88 enzyme complexed with the disaccharide.
J Mol Biol: 2006, 360(3);573-85
[PubMed:16781735] [WorldCat.org] [DOI] (P p)