Difference between revisions of "Regulons"

From SubtiWiki
Jump to: navigation, search
(Additional regulatory mechanisms)
(RNA switches)
 
(5 intermediate revisions by 2 users not shown)
Line 101: Line 101:
 
* [[LmrA regulon]], see also [[LmrA]]
 
* [[LmrA regulon]], see also [[LmrA]]
 
* [[LutR regulon]], see also [[LutR]]
 
* [[LutR regulon]], see also [[LutR]]
 +
* [[LytT regulon]], see also [[LytT]]
 
* [[MalR regulon]], see also [[MalR]]
 
* [[MalR regulon]], see also [[MalR]]
 
* [[ManR regulon]], see also [[ManR]]
 
* [[ManR regulon]], see also [[ManR]]
Line 118: Line 119:
 
* [[OpcR regulon]], see also [[OpcR]]
 
* [[OpcR regulon]], see also [[OpcR]]
 
* [[PadR regulon]], see also [[PadR]]
 
* [[PadR regulon]], see also [[PadR]]
 +
* [[PchR regulon]], see also [[YvmB]]
 
* [[PerR regulon]], see also [[PerR]]
 
* [[PerR regulon]], see also [[PerR]]
 
* [[PhoP regulon]], see also [[PhoP]]
 
* [[PhoP regulon]], see also [[PhoP]]
Line 146: Line 148:
 
* [[Spx regulon]], see also [[Spx]]
 
* [[Spx regulon]], see also [[Spx]]
 
* [[TilS-HprT regulon]], see also [[TilS]], [[HprT]]
 
* [[TilS-HprT regulon]], see also [[TilS]], [[HprT]]
 +
* [[ThrR regulon]], see also [[ThrR]]
 
* [[TnrA regulon]], see also [[TnrA]]
 
* [[TnrA regulon]], see also [[TnrA]]
 
* [[TreR regulon]], see also [[TreR]]
 
* [[TreR regulon]], see also [[TreR]]
Line 175: Line 178:
  
 
* [[A-box]]
 
* [[A-box]]
 +
* [[B12 riboswitch]]
 
* [[EAR riboswitch]]
 
* [[EAR riboswitch]]
 
* [[FMN-box]]
 
* [[FMN-box]]
Line 196: Line 200:
 
* [[TRAP regulon]], see also [[MtrB]]
 
* [[TRAP regulon]], see also [[MtrB]]
 
* [[YdaO riboswitch]]
 
* [[YdaO riboswitch]]
 +
* [[YkkC riboswitch]]
 
* [[yybP-ykoY motif]]
 
* [[yybP-ykoY motif]]
 
* [[RNA switch/ other]]
 
* [[RNA switch/ other]]
 +
 +
= [[RNases]] =
 +
* [[RNase III targets]]
 +
* [[RNase Y targets]]
  
 
= Additional regulatory mechanisms =
 
= Additional regulatory mechanisms =

Latest revision as of 09:13, 22 December 2016

Overview on the regulons in B. subtilis

Sigma factors

DNA-binding regulators

RNA switches

RNases

Additional regulatory mechanisms

Key publications

Han Zhang, Yanbin Yin, Victor Olman, Ying Xu
Genomic arrangement of regulons in bacterial genomes.
PLoS One: 2012, 7(1);e29496
[PubMed:22235300] [WorldCat.org] [DOI] (I p)