Difference between revisions of "RbsD"
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|style="background:#ABCDEF;" align="center"|'''Function''' || ribose uptake | |style="background:#ABCDEF;" align="center"|'''Function''' || ribose uptake | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU35930 rbsD] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/RbsD RbsD] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/RbsD RbsD] | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rbsK]]'', ''[[rbsA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rbsK]]'', ''[[rbsA]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35930 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35930 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35930 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:rbsD_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:rbsD_context.gif]] | ||
Revision as of 14:01, 13 May 2013
- Description: ribose ABC transporter (membrane protein)
| Gene name | rbsD |
| Synonyms | |
| Essential | no |
| Product | ribose ABC transporter (membrane protein) |
| Function | ribose uptake |
| Gene expression levels in SubtiExpress: rbsD | |
| Interactions involving this protein in SubtInteract: RbsD | |
| Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
| MW, pI | 14 kDa, 4.987 |
| Gene length, protein length | 393 bp, 131 aa |
| Immediate neighbours | rbsK, rbsA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
ABC transporters, utilization of specific carbon sources, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU35930
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: RbsD subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane PubMed
Database entries
- Structure: 1OGD (complex with D-ribose)
- UniProt: P36946
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
